Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2810

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,242,281	+		Rru_A2809	0.68	+1.0
3,242,283	+		Rru_A2809	0.68	-0.0
3,242,361	+		Rru_A2809	0.72	-0.0
3,242,400	+		Rru_A2809	0.74	-0.0
3,242,619	+		Rru_A2809	0.85	+1.7
3,242,619	+		Rru_A2809	0.85	+0.8
3,242,619	+		Rru_A2809	0.85	-0.0
3,242,620	-		Rru_A2809	0.85	+0.7
3,242,639	-		Rru_A2809	0.86	+1.0
3,242,650	+		Rru_A2809	0.86	-0.0
3,242,683	-		Rru_A2809	0.88	+2.8
3,242,683	-		Rru_A2809	0.88	+1.2
3,242,892	-				+1.0
3,242,935	-				+1.3
3,242,947	+				+1.5
3,242,947	+				-1.0
3,242,998	+				+0.8
3,242,998	+				+0.6
3,242,999	-				+0.6
3,242,999	-				-0.0
3,243,134	+				-0.0
3,243,134	+				+0.6
3,243,438	+		Rru_A2810	0.24	+0.1
3,243,438	+		Rru_A2810	0.24	+1.1
3,243,645	+		Rru_A2810	0.42	+2.1
3,243,646	-		Rru_A2810	0.42	+1.2
3,243,646	-		Rru_A2810	0.42	-0.0
3,243,685	-		Rru_A2810	0.46	-0.0
3,243,685	-		Rru_A2810	0.46	-0.0
3,243,685	-		Rru_A2810	0.46	-0.0
3,243,685	-		Rru_A2810	0.46	+0.8
3,243,777	+		Rru_A2810	0.54	+1.7
3,243,777	+		Rru_A2810	0.54	+1.2
3,243,777	+		Rru_A2810	0.54	-0.0
3,243,778	-		Rru_A2810	0.54	+1.0
3,243,778	-		Rru_A2810	0.54	-0.8
3,243,778	-		Rru_A2810	0.54	+1.6
3,243,792	-		Rru_A2810	0.55	+1.3
3,243,825	+		Rru_A2810	0.58	+2.6
3,243,825	+		Rru_A2810	0.58	-0.9
3,243,826	-		Rru_A2810	0.58	+1.2
3,243,826	-		Rru_A2810	0.58	-0.0
3,244,227	+				-0.0
3,244,362	+				-0.2
3,244,362	+				+1.2
3,244,363	-				-0.0
3,244,363	-				+0.8
3,244,363	-				+2.6
3,244,364	+				+1.1
3,244,364	+				+2.0
3,244,364	+				-0.0
3,244,365	-				+1.1
3,244,501	+				+1.6
3,244,501	+				+1.3
3,244,501	+				-0.0
3,244,502	-				+1.6
3,244,519	+				-0.0
3,244,519	+				-0.0
3,244,519	+				-2.0
3,244,519	+				+2.0
3,244,519	+				+0.5
3,244,520	-				-0.0
3,244,520	-				+1.3
3,244,548	+		Rru_A2811	0.11	-0.0
3,244,548	+		Rru_A2811	0.11	-1.0
3,244,711	+		Rru_A2811	0.23	-0.6
3,244,711	+		Rru_A2811	0.23	+2.0
3,244,711	+		Rru_A2811	0.23	+0.9
3,244,711	+		Rru_A2811	0.23	-0.0
3,244,711	+		Rru_A2811	0.23	+2.0
3,244,712	-		Rru_A2811	0.23	-0.0
3,244,766	+		Rru_A2811	0.27	-0.0
3,244,766	-		Rru_A2811	0.27	+1.3
3,244,766	-		Rru_A2811	0.27	-0.0
3,244,813	+		Rru_A2811	0.31	+1.0
3,244,819	+		Rru_A2811	0.31	+1.0
3,244,819	+		Rru_A2811	0.31	-0.0
3,244,819	+		Rru_A2811	0.31	-0.0
3,244,819	+		Rru_A2811	0.31	+0.6
3,244,988	-		Rru_A2811	0.44	-1.0
3,245,061	+		Rru_A2811	0.50	+0.6
3,245,062	-		Rru_A2811	0.50	-0.0
3,245,062	-		Rru_A2811	0.50	-0.0
3,245,101	+		Rru_A2811	0.53	+1.9
3,245,101	+		Rru_A2811	0.53	-0.0
3,245,101	+		Rru_A2811	0.53	-0.3
3,245,101	+		Rru_A2811	0.53	+2.5
3,245,101	+		Rru_A2811	0.53	-1.0
3,245,101	+		Rru_A2811	0.53	-0.0
3,245,101	+		Rru_A2811	0.53	+2.0
3,245,101	+		Rru_A2811	0.53	+2.4
3,245,101	+		Rru_A2811	0.53	-0.0
3,245,101	+		Rru_A2811	0.53	+1.1
3,245,101	+		Rru_A2811	0.53	+0.6
3,245,101	+		Rru_A2811	0.53	+0.3
3,245,102	-		Rru_A2811	0.53	+0.9
3,245,102	-		Rru_A2811	0.53	+0.7
3,245,102	-		Rru_A2811	0.53	-0.0
3,245,102	-		Rru_A2811	0.53	-0.0
3,245,102	-		Rru_A2811	0.53	-0.0
3,245,102	-		Rru_A2811	0.53	+1.1
3,245,102	-		Rru_A2811	0.53	-0.0
3,245,102	-		Rru_A2811	0.53	-0.0
3,245,102	-		Rru_A2811	0.53	+1.0
3,245,102	-		Rru_A2811	0.53	-0.0
3,245,107	+		Rru_A2811	0.53	+1.1
3,245,108	-		Rru_A2811	0.53	+0.9
3,245,114	-		Rru_A2811	0.54	-0.0