Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2809

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,240,134	+				+1.8
3,240,134	+				-0.0
3,240,134	+				+2.6
3,240,247	-				+1.7
3,240,247	-				+0.7
3,240,261	+				+1.0
3,240,261	+				-0.3
3,240,262	-				+1.4
3,240,262	-				+2.1
3,240,325	+		Rru_A2808	0.15	+0.5
3,240,325	+		Rru_A2808	0.15	+1.6
3,240,493	-		Rru_A2808	0.47	-0.0
3,240,508	-		Rru_A2808	0.50	-0.2
3,240,508	-		Rru_A2808	0.50	+1.3
3,240,736	+				+2.1
3,240,736	+				+0.7
3,240,736	+				-0.0
3,240,737	-				+1.6
3,240,737	-				-0.0
3,240,816	+				+1.6
3,240,817	-				+1.7
3,240,825	+				+1.8
3,240,825	+				+1.0
3,240,826	-				+0.9
3,240,826	-				-0.0
3,240,826	-				+0.3
3,240,836	-				+1.0
3,240,844	-				+1.1
3,240,844	-				-1.0
3,241,039	-				+0.4
3,241,141	+		Rru_A2809	0.10	+1.6
3,241,155	+		Rru_A2809	0.11	-0.0
3,241,155	+		Rru_A2809	0.11	+3.3
3,241,156	-		Rru_A2809	0.11	+1.6
3,241,156	-		Rru_A2809	0.11	+2.3
3,241,156	-		Rru_A2809	0.11	-1.0
3,241,156	-		Rru_A2809	0.11	-0.3
3,241,227	+		Rru_A2809	0.15	+1.8
3,241,228	-		Rru_A2809	0.15	-0.0
3,241,245	-		Rru_A2809	0.15	-0.0
3,241,317	+		Rru_A2809	0.19	+1.6
3,241,317	+		Rru_A2809	0.19	+1.7
3,241,423	+		Rru_A2809	0.24	+1.1
3,241,424	-		Rru_A2809	0.25	+1.2
3,241,425	+		Rru_A2809	0.25	+2.1
3,241,425	+		Rru_A2809	0.25	+1.4
3,241,426	-		Rru_A2809	0.25	-0.0
3,241,426	-		Rru_A2809	0.25	+2.6
3,241,426	-		Rru_A2809	0.25	+1.8
3,241,426	-		Rru_A2809	0.25	-0.0
3,241,426	-		Rru_A2809	0.25	-0.0
3,241,467	+		Rru_A2809	0.27	-0.0
3,241,468	-		Rru_A2809	0.27	-0.0
3,241,653	+		Rru_A2809	0.36	+0.2
3,241,653	+		Rru_A2809	0.36	-0.0
3,241,653	+		Rru_A2809	0.36	-0.0
3,241,653	+		Rru_A2809	0.36	+0.3
3,241,653	+		Rru_A2809	0.36	+3.3
3,241,654	-		Rru_A2809	0.36	-0.0
3,241,654	-		Rru_A2809	0.36	-0.0
3,241,654	-		Rru_A2809	0.36	+1.6
3,241,654	-		Rru_A2809	0.36	-0.0
3,241,719	+		Rru_A2809	0.39	+0.9
3,241,720	-		Rru_A2809	0.39	+1.0
3,241,720	-		Rru_A2809	0.39	-0.0
3,241,720	-		Rru_A2809	0.39	-0.0
3,241,720	-		Rru_A2809	0.39	-0.5
3,241,720	-		Rru_A2809	0.39	-1.0
3,241,944	+		Rru_A2809	0.51	+0.9
3,241,945	-		Rru_A2809	0.51	-0.0
3,241,945	-		Rru_A2809	0.51	+0.5
3,242,281	+		Rru_A2809	0.68	+1.0
3,242,283	+		Rru_A2809	0.68	-0.0
3,242,361	+		Rru_A2809	0.72	-0.0
3,242,400	+		Rru_A2809	0.74	-0.0
3,242,619	+		Rru_A2809	0.85	+1.7
3,242,619	+		Rru_A2809	0.85	+0.8
3,242,619	+		Rru_A2809	0.85	-0.0
3,242,620	-		Rru_A2809	0.85	+0.7
3,242,639	-		Rru_A2809	0.86	+1.0
3,242,650	+		Rru_A2809	0.86	-0.0
3,242,683	-		Rru_A2809	0.88	+2.8
3,242,683	-		Rru_A2809	0.88	+1.2
3,242,892	-				+1.0
3,242,935	-				+1.3
3,242,947	+				+1.5
3,242,947	+				-1.0
3,242,998	+				+0.8
3,242,998	+				+0.6
3,242,999	-				+0.6
3,242,999	-				-0.0
3,243,134	+				-0.0
3,243,134	+				+0.6
3,243,438	+		Rru_A2810	0.24	+0.1
3,243,438	+		Rru_A2810	0.24	+1.1
3,243,645	+		Rru_A2810	0.42	+2.1
3,243,646	-		Rru_A2810	0.42	+1.2
3,243,646	-		Rru_A2810	0.42	-0.0
3,243,685	-		Rru_A2810	0.46	-0.0
3,243,685	-		Rru_A2810	0.46	-0.0
3,243,685	-		Rru_A2810	0.46	-0.0
3,243,685	-		Rru_A2810	0.46	+0.8
3,243,777	+		Rru_A2810	0.54	+1.7
3,243,777	+		Rru_A2810	0.54	+1.2
3,243,777	+		Rru_A2810	0.54	-0.0
3,243,778	-		Rru_A2810	0.54	+1.0
3,243,778	-		Rru_A2810	0.54	-0.8
3,243,778	-		Rru_A2810	0.54	+1.6
3,243,792	-		Rru_A2810	0.55	+1.3
3,243,825	+		Rru_A2810	0.58	+2.6
3,243,825	+		Rru_A2810	0.58	-0.9
3,243,826	-		Rru_A2810	0.58	+1.2
3,243,826	-		Rru_A2810	0.58	-0.0