Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2807

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,237,874	+		Rru_A2806	0.38	+1.7
3,237,875	-		Rru_A2806	0.38	+2.3
3,237,886	+		Rru_A2806	0.39	+1.2
3,237,898	+		Rru_A2806	0.40	+1.0
3,237,898	+		Rru_A2806	0.40	-0.0
3,237,898	+		Rru_A2806	0.40	-0.0
3,237,898	+		Rru_A2806	0.40	-0.0
3,237,899	-		Rru_A2806	0.40	+1.2
3,238,301	-		Rru_A2806	0.71	+1.1
3,238,301	-		Rru_A2806	0.71	-0.0
3,238,301	-		Rru_A2806	0.71	+1.8
3,238,301	-		Rru_A2806	0.71	-0.0
3,238,301	-		Rru_A2806	0.71	+0.4
3,238,376	+		Rru_A2806	0.77	-0.0
3,238,376	+		Rru_A2806	0.77	-0.0
3,238,376	+		Rru_A2806	0.77	-0.8
3,238,379	+		Rru_A2806	0.77	-0.0
3,238,380	-		Rru_A2806	0.77	-0.0
3,238,380	-		Rru_A2806	0.77	+2.3
3,238,453	+		Rru_A2806	0.83	-0.0
3,238,454	-		Rru_A2806	0.83	-0.0
3,238,454	-		Rru_A2806	0.83	-0.0
3,238,520	-		Rru_A2806	0.88	+2.1
3,238,736	+				-0.0
3,238,736	+				-0.0
3,238,737	-				-0.0
3,238,766	+				+0.8
3,238,767	-				-0.4
3,238,811	+				+2.7
3,238,870	+		Rru_A2807	0.13	+0.7
3,238,870	+		Rru_A2807	0.13	+0.4
3,238,870	+		Rru_A2807	0.13	-1.0
3,238,870	+		Rru_A2807	0.13	-0.3
3,238,871	-		Rru_A2807	0.13	+1.0
3,238,871	-		Rru_A2807	0.13	-0.0
3,239,054	+		Rru_A2807	0.26	-0.2
3,239,055	-		Rru_A2807	0.26	-0.0
3,239,167	-		Rru_A2807	0.33	-1.6
3,239,168	+		Rru_A2807	0.34	-1.0
3,239,169	-		Rru_A2807	0.34	+0.6
3,239,169	-		Rru_A2807	0.34	+2.0
3,239,169	-		Rru_A2807	0.34	+1.0
3,239,282	+		Rru_A2807	0.41	+1.8
3,239,294	+		Rru_A2807	0.42	+0.7
3,239,295	-		Rru_A2807	0.42	-0.0
3,239,295	-		Rru_A2807	0.42	+2.0
3,239,526	+		Rru_A2807	0.58	+0.7
3,239,527	-		Rru_A2807	0.58	+1.6
3,239,527	-		Rru_A2807	0.58	-0.0
3,240,134	+				+1.8
3,240,134	+				-0.0
3,240,134	+				+2.6
3,240,247	-				+1.7
3,240,247	-				+0.7
3,240,261	+				+1.0
3,240,261	+				-0.3
3,240,262	-				+1.4
3,240,262	-				+2.1
3,240,325	+		Rru_A2808	0.15	+0.5
3,240,325	+		Rru_A2808	0.15	+1.6
3,240,493	-		Rru_A2808	0.47	-0.0
3,240,508	-		Rru_A2808	0.50	-0.2
3,240,508	-		Rru_A2808	0.50	+1.3
3,240,736	+				+2.1
3,240,736	+				+0.7
3,240,736	+				-0.0
3,240,737	-				+1.6
3,240,737	-				-0.0
3,240,816	+				+1.6
3,240,817	-				+1.7
3,240,825	+				+1.8
3,240,825	+				+1.0
3,240,826	-				+0.9
3,240,826	-				-0.0
3,240,826	-				+0.3
3,240,836	-				+1.0
3,240,844	-				+1.1
3,240,844	-				-1.0
3,241,039	-				+0.4
3,241,141	+		Rru_A2809	0.10	+1.6