Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2763

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,194,647	+				+0.3
3,194,679	+				+1.3
3,194,680	-				-0.0
3,194,680	-				+1.4
3,194,701	-				-0.0
3,194,701	-				-0.0
3,194,701	-				+0.2
3,194,701	-				-0.3
3,194,701	-				-0.0
3,194,701	-				+1.0
3,194,823	+				+0.2
3,194,823	+				-0.6
3,194,824	-				-0.0
3,194,824	-				+2.3
3,194,824	-				+1.1
3,194,824	-				-0.0
3,194,826	-				+1.6
3,194,873	+				-0.0
3,194,873	+				+1.3
3,194,874	-				+1.0
3,194,874	-				-0.2
3,195,146	+				+1.0
3,195,146	+				+0.6
3,195,171	+		Rru_A2762	0.10	+1.2
3,195,349	+		Rru_A2762	0.45	-0.0
3,195,350	-		Rru_A2762	0.45	-0.3
3,195,350	-		Rru_A2762	0.45	+0.6
3,195,350	-		Rru_A2762	0.45	+0.0
3,195,356	-		Rru_A2762	0.46	+0.9
3,195,570	+		Rru_A2762	0.87	-0.0
3,195,597	+				+1.0
3,195,597	+				+1.1
3,195,598	-				-0.0
3,195,625	-				+2.3
3,195,677	-				+0.7
3,195,841	+				+1.5
3,195,841	+				+1.3
3,195,842	-				-0.6
3,195,842	-				-1.5
3,195,897	+		Rru_A2763	0.11	+0.6
3,195,897	+		Rru_A2763	0.11	-0.0
3,195,897	+		Rru_A2763	0.11	+0.5
3,195,898	-		Rru_A2763	0.11	+1.3
3,195,898	-		Rru_A2763	0.11	+1.5
3,195,913	+		Rru_A2763	0.11	-0.9
3,195,914	-		Rru_A2763	0.11	-0.0
3,195,942	+		Rru_A2763	0.13	-0.0
3,195,942	+		Rru_A2763	0.13	+2.1
3,195,943	-		Rru_A2763	0.13	+2.6
3,195,943	-		Rru_A2763	0.13	-0.0
3,196,431	+		Rru_A2763	0.32	+1.2
3,196,626	+		Rru_A2763	0.40	+1.8
3,196,626	+		Rru_A2763	0.40	-0.0
3,196,638	+		Rru_A2763	0.41	-0.0
3,196,638	+		Rru_A2763	0.41	-0.0
3,196,833	+		Rru_A2763	0.49	+1.2
3,196,834	-		Rru_A2763	0.49	-0.0
3,196,834	-		Rru_A2763	0.49	-0.0
3,196,834	-		Rru_A2763	0.49	-0.0
3,196,834	-		Rru_A2763	0.49	+0.4
3,196,834	-		Rru_A2763	0.49	+0.4
3,196,834	-		Rru_A2763	0.49	-0.0
3,197,031	-		Rru_A2763	0.57	+0.2
3,197,035	-		Rru_A2763	0.57	-0.0
3,197,035	-		Rru_A2763	0.57	+1.1
3,197,200	+		Rru_A2763	0.64	+1.0
3,197,200	+		Rru_A2763	0.64	-0.0
3,197,201	-		Rru_A2763	0.64	-0.0
3,197,520	+		Rru_A2763	0.77	-0.0
3,197,520	+		Rru_A2763	0.77	+1.4
3,197,520	+		Rru_A2763	0.77	+1.1
3,197,520	+		Rru_A2763	0.77	-0.0
3,197,545	+		Rru_A2763	0.78	+1.1
3,197,604	+		Rru_A2763	0.80	+1.3
3,197,605	-		Rru_A2763	0.80	-0.0
3,197,628	+		Rru_A2763	0.81	+0.7
3,197,629	-		Rru_A2763	0.81	+1.0
3,197,949	+				+1.1
3,197,949	+				-0.0
3,197,949	+				-0.0
3,197,950	-				-0.0
3,197,952	+				+1.0
3,197,952	+				-1.6
3,197,952	+				-0.0
3,197,952	+				-0.0
3,197,952	+				+1.6
3,197,953	-				-0.0
3,197,953	-				+1.3
3,197,953	-				-0.0
3,197,953	-				+1.0
3,198,010	-				+0.2
3,198,166	-				+4.5
3,198,302	-				+0.7
3,198,336	-				+1.2
3,198,359	+				-0.0
3,198,385	-				-0.0
3,198,435	+				+1.7
3,198,435	+				-0.0
3,198,435	+				+1.9
3,198,436	-				-0.3
3,198,436	-				-0.0
3,198,436	-				-0.0
3,198,436	-				+3.1
3,198,449	-				+0.7
3,198,533	-		Rru_A2764	0.10	+1.9
3,198,543	+		Rru_A2764	0.11	-0.0
3,198,543	+		Rru_A2764	0.11	+1.5
3,198,544	-		Rru_A2764	0.11	-0.0
3,198,625	+		Rru_A2764	0.16	+2.4
3,198,625	+		Rru_A2764	0.16	+1.1
3,198,625	+		Rru_A2764	0.16	+1.3
3,198,625	+		Rru_A2764	0.16	+1.4
3,198,626	-		Rru_A2764	0.17	+1.9
3,198,626	-		Rru_A2764	0.17	+2.6
3,198,626	-		Rru_A2764	0.17	+0.7
3,198,665	-		Rru_A2764	0.19	-0.0
3,198,697	-		Rru_A2764	0.21	-0.0
3,198,697	-		Rru_A2764	0.21	+1.4
3,198,802	+		Rru_A2764	0.29	+1.3
3,198,803	-		Rru_A2764	0.29	+0.4
3,198,803	-		Rru_A2764	0.29	+0.5
3,198,901	-		Rru_A2764	0.35	-0.5
3,198,901	-		Rru_A2764	0.35	-0.0
3,198,962	-		Rru_A2764	0.39	+0.6
3,198,962	-		Rru_A2764	0.39	+0.4
3,198,987	+		Rru_A2764	0.41	+0.6
3,198,987	+		Rru_A2764	0.41	+0.9
3,198,988	-		Rru_A2764	0.41	+1.6
3,198,988	-		Rru_A2764	0.41	+0.4
3,198,988	-		Rru_A2764	0.41	+1.0
3,199,000	+		Rru_A2764	0.42	-0.0
3,199,000	+		Rru_A2764	0.42	+0.9
3,199,000	+		Rru_A2764	0.42	-1.0
3,199,000	+		Rru_A2764	0.42	+1.5
3,199,001	-		Rru_A2764	0.42	+2.7
3,199,001	-		Rru_A2764	0.42	+0.5
3,199,001	-		Rru_A2764	0.42	-0.3