Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2746

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,177,710	+		Rru_A2745	0.12	+1.4
3,177,710	+		Rru_A2745	0.12	+1.4
3,177,710	+		Rru_A2745	0.12	+0.6
3,177,710	+		Rru_A2745	0.12	+1.0
3,177,710	+		Rru_A2745	0.12	+0.7
3,177,711	-		Rru_A2745	0.12	+0.6
3,177,711	-		Rru_A2745	0.12	-1.8
3,177,711	-		Rru_A2745	0.12	+1.4
3,177,711	-		Rru_A2745	0.12	-0.0
3,177,711	-		Rru_A2745	0.12	+0.1
3,177,711	-		Rru_A2745	0.12	+1.1
3,177,805	-		Rru_A2745	0.21	+1.0
3,177,805	-		Rru_A2745	0.21	-0.0
3,177,914	+		Rru_A2745	0.30	-0.1
3,177,915	-		Rru_A2745	0.30	+2.2
3,177,915	-		Rru_A2745	0.30	+1.8
3,178,054	+		Rru_A2745	0.42	+1.6
3,178,054	+		Rru_A2745	0.42	+1.2
3,178,054	+		Rru_A2745	0.42	-0.0
3,178,054	+		Rru_A2745	0.42	+2.8
3,178,054	+		Rru_A2745	0.42	+0.9
3,178,054	+		Rru_A2745	0.42	-0.0
3,178,055	-		Rru_A2745	0.43	-0.0
3,178,055	-		Rru_A2745	0.43	-0.0
3,178,055	-		Rru_A2745	0.43	+1.5
3,178,055	-		Rru_A2745	0.43	+1.9
3,178,073	+		Rru_A2745	0.44	+0.6
3,178,110	+		Rru_A2745	0.47	-0.0
3,178,111	-		Rru_A2745	0.47	-0.0
3,178,242	+		Rru_A2745	0.59	+1.6
3,178,242	+		Rru_A2745	0.59	-0.0
3,178,243	-		Rru_A2745	0.59	-0.0
3,178,243	-		Rru_A2745	0.59	+1.0
3,178,243	-		Rru_A2745	0.59	-0.0
3,178,243	-		Rru_A2745	0.59	+1.1
3,178,243	-		Rru_A2745	0.59	+0.4
3,178,243	-		Rru_A2745	0.59	+1.3
3,178,502	+		Rru_A2745	0.82	+0.3
3,178,502	+		Rru_A2745	0.82	+0.8
3,178,502	+		Rru_A2745	0.82	+0.8
3,178,502	+		Rru_A2745	0.82	-1.0
3,178,505	+		Rru_A2745	0.82	+1.4
3,178,506	-		Rru_A2745	0.82	-2.4
3,178,506	-		Rru_A2745	0.82	+0.6
3,178,506	-		Rru_A2745	0.82	-0.0
3,178,604	+				+1.2
3,178,837	+		Rru_A2746	0.11	+1.9
3,178,837	+		Rru_A2746	0.11	+0.6
3,178,837	+		Rru_A2746	0.11	-0.0
3,178,838	-		Rru_A2746	0.11	-0.0
3,178,838	-		Rru_A2746	0.11	+1.3
3,178,856	+		Rru_A2746	0.13	-0.0
3,178,856	+		Rru_A2746	0.13	-0.0
3,178,856	+		Rru_A2746	0.13	-0.3
3,178,873	+		Rru_A2746	0.14	-0.0
3,178,873	+		Rru_A2746	0.14	+1.0
3,178,873	+		Rru_A2746	0.14	+1.8
3,178,874	-		Rru_A2746	0.14	-0.0
3,179,134	+		Rru_A2746	0.36	+2.9
3,179,134	+		Rru_A2746	0.36	-0.0
3,179,134	+		Rru_A2746	0.36	+0.9
3,179,135	-		Rru_A2746	0.36	+0.7
3,179,135	-		Rru_A2746	0.36	+0.8
3,179,193	-		Rru_A2746	0.41	-0.0
3,179,194	+		Rru_A2746	0.41	-0.0
3,179,194	+		Rru_A2746	0.41	-1.0
3,179,306	+		Rru_A2746	0.51	+1.4
3,179,323	+		Rru_A2746	0.52	+2.3
3,179,324	-		Rru_A2746	0.52	+0.9
3,179,369	-		Rru_A2746	0.56	+2.8
3,179,369	-		Rru_A2746	0.56	+1.1
3,179,532	+		Rru_A2746	0.70	+1.8
3,179,643	+		Rru_A2746	0.79	-0.0
3,179,654	+		Rru_A2746	0.80	+1.6
3,179,654	+		Rru_A2746	0.80	+1.7
3,179,654	+		Rru_A2746	0.80	+1.5
3,179,655	-		Rru_A2746	0.80	-0.2
3,179,702	+		Rru_A2746	0.84	-0.0
3,179,702	+		Rru_A2746	0.84	+3.4
3,179,703	-		Rru_A2746	0.84	-0.0
3,179,886	+				+1.5
3,179,886	+				+0.9
3,179,886	+				+1.3
3,179,886	+				+0.9
3,179,886	+				-0.0
3,179,887	-				+1.2
3,179,993	+				+2.0
3,180,007	+				-0.0
3,180,007	+				+2.1
3,180,008	-				+0.7
3,180,008	-				+1.9
3,180,008	-				+0.8
3,180,024	-				+0.7
3,180,078	+				+1.7
3,180,114	+				-0.0
3,180,114	+				+1.1
3,180,114	+				+2.3
3,180,115	-				+1.9
3,180,115	-				+1.0
3,180,115	-				-1.0
3,180,115	-				+1.0
3,180,115	-				+1.8
3,180,115	-				+1.2
3,180,115	-				-0.0
3,180,352	+		Rru_A2747	0.38	+2.4
3,180,352	+		Rru_A2747	0.38	+0.7
3,180,353	-		Rru_A2747	0.38	-1.0
3,180,355	-		Rru_A2747	0.38	-0.0
3,180,355	-		Rru_A2747	0.38	-0.0
3,180,492	-		Rru_A2747	0.56	+0.9
3,180,846	+				+1.3
3,180,846	+				+0.6
3,180,846	+				-0.0
3,180,846	+				+0.6
3,180,847	-				+1.1
3,180,847	-				+1.2
3,180,847	-				+0.7
3,180,847	-				+0.8
3,180,847	-				-0.0