Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2729

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,155,921	-				+1.6
3,155,933	+				+1.6
3,155,933	+				+0.7
3,155,933	+				+2.5
3,155,934	-				+1.3
3,155,957	+				+1.2
3,155,957	+				-0.0
3,155,957	+				-0.0
3,155,958	-				+1.2
3,155,958	-				-0.0
3,155,958	-				-0.0
3,155,958	-				-0.0
3,156,025	+				+1.7
3,156,025	+				-0.0
3,156,026	-				+2.8
3,156,127	+		Rru_A2728	0.24	+2.6
3,156,128	-		Rru_A2728	0.25	-0.4
3,156,196	+		Rru_A2728	0.35	+0.7
3,156,196	+		Rru_A2728	0.35	-0.2
3,156,196	+		Rru_A2728	0.35	-0.0
3,156,197	-		Rru_A2728	0.35	+1.0
3,156,290	+		Rru_A2728	0.48	-0.0
3,156,290	+		Rru_A2728	0.48	-0.0
3,156,290	+		Rru_A2728	0.48	+1.8
3,156,369	+		Rru_A2728	0.60	+1.0
3,156,500	+		Rru_A2728	0.79	+1.4
3,156,500	+		Rru_A2728	0.79	+4.2
3,156,500	+		Rru_A2728	0.79	-1.0
3,156,501	-		Rru_A2728	0.79	+3.1
3,156,501	-		Rru_A2728	0.79	+0.1
3,156,502	+		Rru_A2728	0.79	+1.0
3,156,503	-		Rru_A2728	0.80	-0.0
3,156,717	+				-0.0
3,156,722	+				+1.4
3,156,722	+				+1.1
3,156,723	-				-0.0
3,157,010	-		Rru_A2729	0.33	+1.6
3,157,354	+				+0.8
3,157,413	+				+0.8
3,157,472	+		Rru_A2730	0.10	+0.6
3,157,473	+		Rru_A2730	0.11	-1.6
3,157,473	+		Rru_A2730	0.11	+2.4
3,157,474	-		Rru_A2730	0.11	+1.0
3,157,474	-		Rru_A2730	0.11	-0.4
3,157,474	-		Rru_A2730	0.11	+0.5
3,157,474	-		Rru_A2730	0.11	+1.0
3,157,474	-		Rru_A2730	0.11	+0.6
3,157,479	+		Rru_A2730	0.13	+0.4
3,157,480	-		Rru_A2730	0.13	+1.2
3,157,480	-		Rru_A2730	0.13	-1.6
3,157,480	-		Rru_A2730	0.13	+2.4
3,157,480	-		Rru_A2730	0.13	-0.6
3,157,554	+		Rru_A2730	0.37	+0.9
3,157,554	+		Rru_A2730	0.37	-0.0
3,157,554	+		Rru_A2730	0.37	-1.4
3,157,554	+		Rru_A2730	0.37	-0.0
3,157,554	+		Rru_A2730	0.37	+1.1
3,157,599	+		Rru_A2730	0.51	+0.6
3,157,599	+		Rru_A2730	0.51	+2.6
3,157,600	-		Rru_A2730	0.51	+1.3
3,157,600	-		Rru_A2730	0.51	-0.0
3,157,600	-		Rru_A2730	0.51	+2.6
3,157,683	+		Rru_A2730	0.77	+0.6
3,157,724	+				-0.0
3,157,724	+				+2.9
3,157,724	+				+0.6
3,157,724	+				-0.0
3,157,724	+				-0.0
3,157,724	+				+0.6
3,157,724	+				+0.9
3,157,724	+				+1.0
3,157,725	-				+0.7
3,157,725	-				+0.8
3,157,725	-				+3.4
3,157,725	-				+0.5
3,157,725	-				+3.6
3,157,725	-				+1.2
3,157,725	-				-0.0
3,157,725	-				-0.0
3,157,725	-				-0.0
3,157,725	-				+1.4
3,157,725	-				-0.0
3,157,725	-				+0.8
3,157,725	-				-0.0
3,157,725	-				+1.8
3,157,728	+				+1.1
3,157,728	+				+1.3
3,157,728	+				+2.7
3,157,728	+				+1.6
3,157,728	+				+1.2
3,157,729	-				-0.0
3,157,729	-				-0.0
3,157,729	-				-0.0
3,157,729	-				-0.0
3,157,789	+				+2.1
3,157,789	+				+1.2
3,157,789	+				+1.4
3,157,789	+				+1.0
3,157,789	+				+1.1
3,157,790	-				-0.0
3,157,790	-				+1.3
3,157,790	-				+0.8