Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2719

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,144,056	+				-0.0
3,144,216	+				+1.4
3,144,216	+				+0.8
3,144,216	+				-0.0
3,144,217	-				+1.7
3,144,217	-				+0.2
3,144,217	-				-0.0
3,144,217	-				-0.0
3,144,303	+		Rru_A2719	0.13	+0.6
3,144,303	+		Rru_A2719	0.13	-0.2
3,144,304	-		Rru_A2719	0.13	+1.4
3,144,567	+		Rru_A2719	0.29	-1.0
3,144,567	+		Rru_A2719	0.29	-0.0
3,144,567	+		Rru_A2719	0.29	-0.0
3,144,567	+		Rru_A2719	0.29	+1.0
3,144,567	+		Rru_A2719	0.29	+1.4
3,144,567	+		Rru_A2719	0.29	+2.5
3,144,567	+		Rru_A2719	0.29	+0.8
3,144,568	-		Rru_A2719	0.29	+0.7
3,144,568	-		Rru_A2719	0.29	-0.0
3,144,568	-		Rru_A2719	0.29	-0.0
3,144,867	+		Rru_A2719	0.47	+0.8
3,144,867	+		Rru_A2719	0.47	+1.2
3,144,867	+		Rru_A2719	0.47	-1.0
3,144,867	+		Rru_A2719	0.47	-0.0
3,144,867	+		Rru_A2719	0.47	+2.4
3,144,868	-		Rru_A2719	0.47	+0.9
3,144,868	-		Rru_A2719	0.47	-0.0
3,144,868	-		Rru_A2719	0.47	+1.0
3,145,037	+		Rru_A2719	0.57	-0.0
3,145,037	+		Rru_A2719	0.57	-0.0
3,145,037	+		Rru_A2719	0.57	-0.0
3,145,037	+		Rru_A2719	0.57	-0.0
3,145,037	+		Rru_A2719	0.57	+2.3
3,145,037	+		Rru_A2719	0.57	+0.4
3,145,037	+		Rru_A2719	0.57	+3.7
3,145,038	-		Rru_A2719	0.57	+0.5
3,145,038	-		Rru_A2719	0.57	+0.8
3,145,041	+		Rru_A2719	0.57	+1.0
3,145,041	+		Rru_A2719	0.57	+1.0
3,145,041	+		Rru_A2719	0.57	-0.0
3,145,041	+		Rru_A2719	0.57	-0.0
3,145,042	-		Rru_A2719	0.57	+0.3
3,145,042	-		Rru_A2719	0.57	+0.8
3,145,042	-		Rru_A2719	0.57	-0.0
3,145,042	-		Rru_A2719	0.57	-0.0
3,145,042	-		Rru_A2719	0.57	+1.2
3,145,042	-		Rru_A2719	0.57	+0.4
3,145,042	-		Rru_A2719	0.57	-0.0
3,145,043	+		Rru_A2719	0.58	+1.4
3,145,044	-		Rru_A2719	0.58	-1.0
3,145,123	+		Rru_A2719	0.62	+1.0
3,145,210	+		Rru_A2719	0.68	+0.9
3,145,211	-		Rru_A2719	0.68	-0.0
3,145,277	+		Rru_A2719	0.72	-0.0
3,145,277	+		Rru_A2719	0.72	+0.2
3,145,277	+		Rru_A2719	0.72	-0.0
3,145,309	-		Rru_A2719	0.74	-0.0
3,145,309	-		Rru_A2719	0.74	+1.2
3,145,309	-		Rru_A2719	0.74	-0.0
3,145,311	+		Rru_A2719	0.74	+1.7
3,145,311	+		Rru_A2719	0.74	+1.2
3,145,312	-		Rru_A2719	0.74	-0.0
3,145,312	-		Rru_A2719	0.74	+0.7
3,145,312	-		Rru_A2719	0.74	+0.7
3,145,519	-		Rru_A2719	0.86	+2.9
3,145,519	-		Rru_A2719	0.86	+1.1
3,145,519	-		Rru_A2719	0.86	+1.4
3,145,520	+		Rru_A2719	0.86	-0.0
3,145,521	-		Rru_A2719	0.86	-1.4
3,145,794	-				+1.0
3,145,995	+				+2.8
3,145,995	+				-0.6
3,145,995	+				-0.0
3,145,995	+				+0.5
3,145,995	+				+2.0
3,145,996	-				-0.0
3,145,996	-				-1.6
3,145,996	-				+1.2
3,145,996	-				+1.4
3,145,996	-				+1.8
3,145,996	-				+0.6
3,146,000	+				-0.0
3,146,000	+				-0.0
3,146,001	-				+1.2
3,146,111	+				+1.7
3,146,111	+				+1.3
3,146,112	-				+1.1
3,146,141	+				-1.0
3,146,141	+				+1.5
3,146,141	+				+1.1
3,146,142	-				+0.8
3,146,142	-				+1.0
3,146,142	-				-0.0
3,146,318	+				-0.0
3,146,318	+				-0.0
3,146,319	-				-0.0
3,146,319	-				+0.5
3,146,319	-				+0.9
3,146,319	-				+1.1
3,146,320	+				+0.7
3,146,320	+				-0.1
3,146,320	+				-0.0
3,146,321	-				+1.5
3,146,321	-				-0.0
3,146,321	-				+0.7
3,146,321	-				-0.0
3,146,512	+				-1.6
3,146,512	+				+1.1
3,146,513	-				+0.7
3,146,513	-				+0.4
3,146,614	+		Rru_A2721	0.12	+0.4
3,146,614	+		Rru_A2721	0.12	+1.8
3,146,614	+		Rru_A2721	0.12	-0.0
3,146,614	+		Rru_A2721	0.12	+1.2
3,146,614	+		Rru_A2721	0.12	+1.2
3,146,614	+		Rru_A2721	0.12	-0.0
3,146,614	+		Rru_A2721	0.12	+1.7
3,146,615	-		Rru_A2721	0.12	-0.0
3,146,615	-		Rru_A2721	0.12	-0.0
3,146,615	-		Rru_A2721	0.12	-0.0
3,146,615	-		Rru_A2721	0.12	+1.0
3,146,615	-		Rru_A2721	0.12	+0.3
3,146,615	-		Rru_A2721	0.12	-0.0
3,146,615	-		Rru_A2721	0.12	+0.3