Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2649

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,077,715	+		Rru_A2648	0.15	+2.3
3,077,715	+		Rru_A2648	0.15	+2.3
3,077,716	-		Rru_A2648	0.15	-0.0
3,077,716	-		Rru_A2648	0.15	-0.0
3,077,716	-		Rru_A2648	0.15	-0.0
3,077,718	+		Rru_A2648	0.15	-0.0
3,077,719	-		Rru_A2648	0.15	+0.5
3,077,719	-		Rru_A2648	0.15	-0.0
3,077,719	-		Rru_A2648	0.15	+2.1
3,078,252	+		Rru_A2648	0.62	+2.0
3,078,252	+		Rru_A2648	0.62	+0.3
3,078,252	+		Rru_A2648	0.62	-0.0
3,078,253	-		Rru_A2648	0.62	+1.8
3,078,253	-		Rru_A2648	0.62	+1.6
3,078,253	-		Rru_A2648	0.62	+2.0
3,078,253	-		Rru_A2648	0.62	-0.0
3,078,253	-		Rru_A2648	0.62	-0.0
3,078,253	-		Rru_A2648	0.62	-0.0
3,078,294	+		Rru_A2648	0.66	-1.6
3,078,330	+		Rru_A2648	0.69	+1.4
3,078,330	+		Rru_A2648	0.69	+2.5
3,078,330	+		Rru_A2648	0.69	-0.0
3,078,330	+		Rru_A2648	0.69	+1.5
3,078,330	+		Rru_A2648	0.69	+1.1
3,078,330	+		Rru_A2648	0.69	+1.3
3,078,331	-		Rru_A2648	0.69	+1.0
3,078,331	-		Rru_A2648	0.69	+0.6
3,078,331	-		Rru_A2648	0.69	+2.0
3,078,331	-		Rru_A2648	0.69	+1.4
3,078,331	-		Rru_A2648	0.69	+0.7
3,078,462	+		Rru_A2648	0.81	-0.0
3,078,501	+		Rru_A2648	0.84	+0.7
3,078,592	-				-0.0
3,078,595	+				-0.0
3,078,595	+				-0.0
3,078,595	+				-0.5
3,078,595	+				+0.8
3,078,596	-				+0.5
3,078,596	-				-0.0
3,078,596	-				+1.3
3,078,603	+				-1.6
3,078,603	+				+2.4
3,078,611	-				+1.0
3,078,685	+				-1.4
3,078,685	+				-0.0
3,078,686	-				+1.0
3,078,827	+		Rru_A2649	0.14	+2.6
3,078,827	+		Rru_A2649	0.14	-0.0
3,078,827	+		Rru_A2649	0.14	+2.0
3,078,828	-		Rru_A2649	0.14	+1.3
3,078,828	-		Rru_A2649	0.14	+0.7
3,078,915	-		Rru_A2649	0.22	+0.8
3,079,115	+		Rru_A2649	0.39	+2.2
3,079,115	+		Rru_A2649	0.39	-0.0
3,079,115	+		Rru_A2649	0.39	-0.0
3,079,116	-		Rru_A2649	0.40	-0.2
3,079,116	-		Rru_A2649	0.40	+2.1
3,079,186	-		Rru_A2649	0.46	-0.0
3,079,186	-		Rru_A2649	0.46	-0.0
3,079,436	+		Rru_A2649	0.68	+2.7
3,079,437	-		Rru_A2649	0.68	+0.9
3,079,580	+		Rru_A2649	0.81	+2.5
3,079,581	-		Rru_A2649	0.81	+1.0
3,079,581	-		Rru_A2649	0.81	+1.9
3,079,583	+		Rru_A2649	0.81	-1.0
3,079,583	+		Rru_A2649	0.81	-0.0
3,079,583	+		Rru_A2649	0.81	+1.3
3,079,655	+		Rru_A2649	0.87	+1.1
3,079,655	+		Rru_A2649	0.87	+0.3
3,079,667	+		Rru_A2649	0.89	+1.8
3,079,667	+		Rru_A2649	0.89	-0.0
3,079,667	+		Rru_A2649	0.89	-0.0
3,079,667	+		Rru_A2649	0.89	+2.0
3,079,667	+		Rru_A2649	0.89	+1.0
3,079,667	+		Rru_A2649	0.89	+0.3
3,079,668	-		Rru_A2649	0.89	-0.0
3,079,730	+				+0.9
3,079,731	-				+1.0
3,079,861	+				+1.4
3,079,861	+				-0.0
3,079,861	+				-0.0
3,080,029	+		Rru_A2650	0.46	-0.2
3,080,030	-		Rru_A2650	0.47	-0.6
3,080,030	-		Rru_A2650	0.47	-0.0
3,080,060	+		Rru_A2650	0.58	-2.0
3,080,060	+		Rru_A2650	0.58	-0.0
3,080,061	-		Rru_A2650	0.58	+1.0
3,080,061	-		Rru_A2650	0.58	-0.0
3,080,061	-		Rru_A2650	0.58	+0.5
3,080,099	-		Rru_A2650	0.73	-0.0
3,080,099	-		Rru_A2650	0.73	-0.0
3,080,100	+		Rru_A2650	0.73	+1.4
3,080,101	-		Rru_A2650	0.73	-0.0
3,080,101	-		Rru_A2650	0.73	+0.3
3,080,324	+				-0.0
3,080,381	+				-0.0
3,080,505	+				-0.0
3,080,505	+				-0.0
3,080,506	-				+1.7
3,080,506	-				-0.0
3,080,508	-				-0.0
3,080,508	-				+2.9
3,080,508	-				-0.0
3,080,508	-				-0.0
3,080,509	+				+1.6
3,080,509	+				+0.3
3,080,509	+				+1.5
3,080,510	-				-0.0
3,080,548	+				-0.0
3,080,548	+				+1.1
3,080,549	-				+3.3
3,080,549	-				+1.7
3,080,549	-				-0.5
3,080,609	+				+0.9
3,080,610	-				+1.7
3,080,652	-				+0.8