Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2647

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,075,384	+		Rru_A2645	0.73	+1.3
3,075,385	-		Rru_A2645	0.73	-0.0
3,075,385	-		Rru_A2645	0.73	-0.0
3,075,385	-		Rru_A2645	0.73	+0.7
3,075,461	-		Rru_A2645	0.79	-0.0
3,075,461	-		Rru_A2645	0.79	+1.3
3,075,461	-		Rru_A2645	0.79	-0.0
3,075,469	+		Rru_A2645	0.80	+0.8
3,075,469	+		Rru_A2645	0.80	-0.0
3,075,469	+		Rru_A2645	0.80	+0.1
3,075,469	+		Rru_A2645	0.80	+1.1
3,075,469	+		Rru_A2645	0.80	+0.6
3,075,470	-		Rru_A2645	0.80	+0.7
3,075,470	-		Rru_A2645	0.80	-0.0
3,075,470	-		Rru_A2645	0.80	+1.5
3,075,470	-		Rru_A2645	0.80	+1.3
3,075,470	-		Rru_A2645	0.80	-0.0
3,075,470	-		Rru_A2645	0.80	-0.0
3,076,244	-				+0.7
3,076,298	-				-0.0
3,076,636	+		Rru_A2647	0.30	+1.7
3,076,637	-		Rru_A2647	0.30	+2.8
3,076,637	-		Rru_A2647	0.30	+1.4
3,076,777	+		Rru_A2647	0.43	+1.7
3,076,777	+		Rru_A2647	0.43	+0.7
3,076,778	-		Rru_A2647	0.43	-0.0
3,076,778	-		Rru_A2647	0.43	-0.0
3,076,778	-		Rru_A2647	0.43	-0.0
3,076,778	-		Rru_A2647	0.43	+2.5
3,076,778	-		Rru_A2647	0.43	+0.1
3,076,778	-		Rru_A2647	0.43	-0.0
3,076,778	-		Rru_A2647	0.43	+1.1
3,076,925	+		Rru_A2647	0.56	+1.3
3,076,926	-		Rru_A2647	0.56	+1.2
3,076,942	+		Rru_A2647	0.57	+1.9
3,076,942	+		Rru_A2647	0.57	-0.0
3,076,942	+		Rru_A2647	0.57	+1.4
3,076,943	-		Rru_A2647	0.57	+1.7
3,076,974	-		Rru_A2647	0.60	+0.5
3,077,218	+		Rru_A2647	0.82	+1.5
3,077,219	-		Rru_A2647	0.82	+1.3
3,077,219	-		Rru_A2647	0.82	+0.4
3,077,231	+		Rru_A2647	0.83	+2.2
3,077,340	+				-0.0
3,077,340	+				-0.0
3,077,514	+				-0.0
3,077,514	+				+1.8
3,077,515	-				-0.2
3,077,515	-				+1.4
3,077,515	-				-0.0
3,077,669	+		Rru_A2648	0.11	-0.0
3,077,670	-		Rru_A2648	0.11	+1.9
3,077,715	+		Rru_A2648	0.15	+2.3
3,077,715	+		Rru_A2648	0.15	+2.3
3,077,716	-		Rru_A2648	0.15	-0.0
3,077,716	-		Rru_A2648	0.15	-0.0
3,077,716	-		Rru_A2648	0.15	-0.0
3,077,718	+		Rru_A2648	0.15	-0.0
3,077,719	-		Rru_A2648	0.15	+0.5
3,077,719	-		Rru_A2648	0.15	-0.0
3,077,719	-		Rru_A2648	0.15	+2.1
3,078,252	+		Rru_A2648	0.62	+2.0
3,078,252	+		Rru_A2648	0.62	+0.3
3,078,252	+		Rru_A2648	0.62	-0.0
3,078,253	-		Rru_A2648	0.62	+1.8
3,078,253	-		Rru_A2648	0.62	+1.6
3,078,253	-		Rru_A2648	0.62	+2.0
3,078,253	-		Rru_A2648	0.62	-0.0
3,078,253	-		Rru_A2648	0.62	-0.0
3,078,253	-		Rru_A2648	0.62	-0.0
3,078,294	+		Rru_A2648	0.66	-1.6
3,078,330	+		Rru_A2648	0.69	+1.4
3,078,330	+		Rru_A2648	0.69	+2.5
3,078,330	+		Rru_A2648	0.69	-0.0
3,078,330	+		Rru_A2648	0.69	+1.5
3,078,330	+		Rru_A2648	0.69	+1.1
3,078,330	+		Rru_A2648	0.69	+1.3
3,078,331	-		Rru_A2648	0.69	+1.0
3,078,331	-		Rru_A2648	0.69	+0.6
3,078,331	-		Rru_A2648	0.69	+2.0
3,078,331	-		Rru_A2648	0.69	+1.4
3,078,331	-		Rru_A2648	0.69	+0.7