Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2638

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,066,706	+		Rru_A2637	0.68	+0.7
3,066,706	+		Rru_A2637	0.68	+1.4
3,066,706	+		Rru_A2637	0.68	-0.0
3,066,706	+		Rru_A2637	0.68	+1.2
3,066,706	+		Rru_A2637	0.68	-1.0
3,066,706	+		Rru_A2637	0.68	+1.0
3,066,706	+		Rru_A2637	0.68	+0.2
3,066,707	-		Rru_A2637	0.68	+0.5
3,066,707	-		Rru_A2637	0.68	+0.8
3,066,707	-		Rru_A2637	0.68	-0.0
3,067,197	+		Rru_A2637	0.88	+0.9
3,067,197	+		Rru_A2637	0.88	+1.1
3,067,354	+				-1.0
3,067,437	-				+1.5
3,067,477	+				+1.8
3,067,770	+		Rru_A2638	0.15	-0.6
3,067,846	+		Rru_A2638	0.24	+0.5
3,067,846	+		Rru_A2638	0.24	-0.5
3,067,999	+		Rru_A2638	0.42	+1.0
3,068,033	+		Rru_A2638	0.46	+0.4
3,068,033	+		Rru_A2638	0.46	+0.8
3,068,033	+		Rru_A2638	0.46	-0.0
3,068,033	+		Rru_A2638	0.46	-1.0
3,068,033	+		Rru_A2638	0.46	+1.4
3,068,034	-		Rru_A2638	0.47	+0.2
3,068,035	+		Rru_A2638	0.47	+0.5
3,068,035	+		Rru_A2638	0.47	+1.6
3,068,035	+		Rru_A2638	0.47	+2.5
3,068,036	-		Rru_A2638	0.47	+1.2
3,068,086	+		Rru_A2638	0.53	-0.0
3,068,086	+		Rru_A2638	0.53	+0.3
3,068,086	+		Rru_A2638	0.53	+0.9
3,068,086	+		Rru_A2638	0.53	+0.9
3,068,086	+		Rru_A2638	0.53	+1.4
3,068,087	-		Rru_A2638	0.53	-0.0
3,068,087	-		Rru_A2638	0.53	+1.5
3,068,087	-		Rru_A2638	0.53	-0.0
3,068,087	-		Rru_A2638	0.53	-1.0
3,068,087	-		Rru_A2638	0.53	+0.4
3,068,106	-		Rru_A2638	0.55	+0.5
3,068,149	-		Rru_A2638	0.60	+0.5
3,068,149	-		Rru_A2638	0.60	+1.0
3,068,154	+		Rru_A2638	0.61	-0.0
3,068,154	+		Rru_A2638	0.61	-0.0
3,068,183	+		Rru_A2638	0.64	-0.0
3,068,253	+		Rru_A2638	0.72	-0.0
3,068,254	-		Rru_A2638	0.72	-0.6
3,068,254	-		Rru_A2638	0.72	-0.0
3,068,254	-		Rru_A2638	0.72	-0.0
3,068,306	-		Rru_A2638	0.79	-0.0
3,068,306	-		Rru_A2638	0.79	-0.0
3,068,358	+		Rru_A2638	0.85	-0.0
3,068,358	+		Rru_A2638	0.85	-1.0
3,068,358	+		Rru_A2638	0.85	+0.2
3,068,358	+		Rru_A2638	0.85	+1.7
3,068,359	-		Rru_A2638	0.85	+0.4
3,068,362	+		Rru_A2638	0.85	+0.2
3,068,362	+		Rru_A2638	0.85	+0.1
3,068,362	+		Rru_A2638	0.85	+0.9
3,068,363	-		Rru_A2638	0.85	+1.2
3,068,374	+		Rru_A2638	0.87	-0.0
3,068,374	+		Rru_A2638	0.87	+0.4
3,068,374	+		Rru_A2638	0.87	+0.2
3,068,375	-		Rru_A2638	0.87	-1.0
3,068,375	-		Rru_A2638	0.87	+0.6
3,068,375	-		Rru_A2638	0.87	+1.0
3,068,630	-				+1.0
3,068,630	-				+2.7
3,068,647	+				+1.2
3,068,648	-				-0.4
3,068,648	-				-0.0
3,068,715	-				+1.3
3,068,740	+				+1.1
3,068,741	-				+1.2
3,068,741	-				+1.7
3,068,771	-		Rru_A2639	0.13	-0.0
3,068,795	+		Rru_A2639	0.16	+0.8
3,068,795	+		Rru_A2639	0.16	-0.0
3,069,046	+		Rru_A2639	0.42	+1.1
3,069,046	+		Rru_A2639	0.42	-0.0
3,069,047	-		Rru_A2639	0.42	+0.6
3,069,047	-		Rru_A2639	0.42	+1.1
3,069,047	-		Rru_A2639	0.42	+1.2
3,069,079	+		Rru_A2639	0.45	+0.8
3,069,079	+		Rru_A2639	0.45	+2.0
3,069,080	-		Rru_A2639	0.45	-0.0
3,069,080	-		Rru_A2639	0.45	-0.0
3,069,158	+		Rru_A2639	0.54	-0.0
3,069,159	-		Rru_A2639	0.54	+0.4
3,069,159	-		Rru_A2639	0.54	+2.9
3,069,159	-		Rru_A2639	0.54	+2.2
3,069,170	-		Rru_A2639	0.55	-0.0
3,069,253	+		Rru_A2639	0.63	-0.0
3,069,353	+		Rru_A2639	0.74	+0.3
3,069,353	+		Rru_A2639	0.74	+0.9
3,069,353	+		Rru_A2639	0.74	+0.0
3,069,354	-		Rru_A2639	0.74	-1.0
3,069,354	-		Rru_A2639	0.74	-0.2
3,069,354	-		Rru_A2639	0.74	+2.2
3,069,354	-		Rru_A2639	0.74	-0.0
3,069,354	-		Rru_A2639	0.74	+0.9
3,069,354	-		Rru_A2639	0.74	+1.3
3,069,354	-		Rru_A2639	0.74	+0.4
3,069,450	-		Rru_A2639	0.84	+1.8
3,069,462	+		Rru_A2639	0.85	+0.6
3,069,462	+		Rru_A2639	0.85	-0.0
3,069,463	-		Rru_A2639	0.85	-0.0
3,069,463	-		Rru_A2639	0.85	+1.0