Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2545

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,958,229	+		Rru_A2544	0.42	+0.3
2,958,229	+		Rru_A2544	0.42	+0.3
2,958,229	+		Rru_A2544	0.42	-0.0
2,958,229	+		Rru_A2544	0.42	-0.0
2,958,229	+		Rru_A2544	0.42	+1.0
2,958,229	+		Rru_A2544	0.42	-0.0
2,958,229	+		Rru_A2544	0.42	-0.0
2,958,229	+		Rru_A2544	0.42	-0.0
2,958,229	+		Rru_A2544	0.42	+1.4
2,958,230	-		Rru_A2544	0.42	+0.8
2,958,230	-		Rru_A2544	0.42	-0.0
2,958,230	-		Rru_A2544	0.42	+1.0
2,958,230	-		Rru_A2544	0.42	-0.0
2,958,230	-		Rru_A2544	0.42	-0.0
2,958,230	-		Rru_A2544	0.42	-1.0
2,958,394	+		Rru_A2544	0.53	+1.2
2,958,395	-		Rru_A2544	0.53	-0.0
2,958,615	+		Rru_A2544	0.68	-0.0
2,958,718	+		Rru_A2544	0.75	+0.4
2,958,835	+		Rru_A2544	0.83	-0.0
2,958,835	+		Rru_A2544	0.83	+1.6
2,959,001	-				-0.0
2,959,121	+				+1.3
2,959,152	+				+0.8
2,959,153	-				+1.4
2,959,183	+				+1.4
2,959,183	+				+1.6
2,959,183	+				-0.0
2,959,183	+				+2.0
2,959,183	+				-0.0
2,959,184	-				+1.8
2,959,184	-				-0.0
2,959,432	+		Rru_A2545	0.45	+1.0
2,959,432	+		Rru_A2545	0.45	+1.5
2,959,736	+				+1.1
2,959,736	+				+1.0
2,959,736	+				-0.0
2,959,736	+				-0.0
2,959,736	+				-0.0
2,959,737	-				-1.0
2,959,737	-				+1.0
2,959,737	-				-0.0
2,959,737	-				+1.1
2,959,738	+				+2.4
2,959,738	+				-0.6
2,959,738	+				+1.0
2,959,738	+				-0.0
2,959,738	+				+1.0
2,959,738	+				+0.9
2,959,738	+				+1.0
2,959,738	+				+0.9
2,959,738	+				+1.0
2,959,739	-				-0.0
2,959,739	-				+1.0
2,959,739	-				+2.1
2,959,930	-				+1.3
2,960,284	+		Rru_A2546	0.23	-0.0
2,960,284	+		Rru_A2546	0.23	+1.3
2,960,284	+		Rru_A2546	0.23	+1.4
2,960,284	+		Rru_A2546	0.23	+1.1
2,960,284	+		Rru_A2546	0.23	+1.9
2,960,285	-		Rru_A2546	0.23	-0.0
2,960,285	-		Rru_A2546	0.23	+0.7