Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2540

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,952,716	+				+0.6
2,952,748	+				+0.9
2,952,749	-				-0.0
2,952,832	-				+1.3
2,953,200	+		Rru_A2539	0.75	+2.0
2,953,201	-		Rru_A2539	0.75	-0.0
2,953,223	+		Rru_A2539	0.80	-1.0
2,953,223	+		Rru_A2539	0.80	-0.0
2,953,223	+		Rru_A2539	0.80	+1.3
2,953,224	-		Rru_A2539	0.80	+1.0
2,953,435	+				-1.0
2,953,435	+				+1.4
2,953,451	+				+1.0
2,953,451	+				-0.0
2,953,451	+				+0.5
2,953,451	+				+0.0
2,953,451	+				+0.6
2,953,452	-				+1.4
2,953,452	-				+1.8
2,953,452	-				+0.8
2,953,452	-				+0.6
2,953,532	+		Rru_A2540	0.12	-0.0
2,953,533	-		Rru_A2540	0.12	+0.8
2,953,533	-		Rru_A2540	0.12	-0.0
2,953,533	-		Rru_A2540	0.12	-0.0
2,953,664	+		Rru_A2540	0.23	+0.6
2,953,664	+		Rru_A2540	0.23	+2.0
2,953,664	+		Rru_A2540	0.23	+0.7
2,953,664	+		Rru_A2540	0.23	+1.7
2,953,665	-		Rru_A2540	0.23	-1.6
2,953,715	+		Rru_A2540	0.28	+0.3
2,953,715	+		Rru_A2540	0.28	-0.0
2,953,716	-		Rru_A2540	0.28	-0.0
2,953,813	+		Rru_A2540	0.36	+3.2
2,953,813	+		Rru_A2540	0.36	+0.9
2,953,813	+		Rru_A2540	0.36	+1.8
2,953,814	-		Rru_A2540	0.36	+0.8
2,953,814	-		Rru_A2540	0.36	-0.4
2,953,814	-		Rru_A2540	0.36	-0.0
2,953,814	-		Rru_A2540	0.36	+0.6
2,953,814	-		Rru_A2540	0.36	+1.7
2,953,814	-		Rru_A2540	0.36	-0.0
2,953,814	-		Rru_A2540	0.36	+2.1
2,954,054	+		Rru_A2540	0.57	+3.4
2,954,054	+		Rru_A2540	0.57	-1.0
2,954,054	+		Rru_A2540	0.57	-0.4
2,954,054	+		Rru_A2540	0.57	-0.0
2,954,054	+		Rru_A2540	0.57	-0.0
2,954,055	-		Rru_A2540	0.57	+1.1
2,954,055	-		Rru_A2540	0.57	+0.6
2,954,055	-		Rru_A2540	0.57	+1.6
2,954,055	-		Rru_A2540	0.57	+1.0
2,954,056	+		Rru_A2540	0.57	-0.0
2,954,056	+		Rru_A2540	0.57	+1.2
2,954,057	-		Rru_A2540	0.57	-0.0
2,954,108	+		Rru_A2540	0.61	+1.6
2,954,108	+		Rru_A2540	0.61	-0.0
2,954,108	+		Rru_A2540	0.61	+0.3
2,954,108	+		Rru_A2540	0.61	+1.5
2,954,109	-		Rru_A2540	0.61	+1.3
2,954,109	-		Rru_A2540	0.61	+1.7
2,954,109	-		Rru_A2540	0.61	-0.0
2,954,109	-		Rru_A2540	0.61	+0.5
2,954,109	-		Rru_A2540	0.61	+1.0
2,954,109	-		Rru_A2540	0.61	+1.6
2,954,109	-		Rru_A2540	0.61	-0.0
2,954,110	+		Rru_A2540	0.61	+0.7
2,954,110	+		Rru_A2540	0.61	-0.0
2,954,110	+		Rru_A2540	0.61	+1.2
2,954,111	-		Rru_A2540	0.61	-1.0
2,954,111	-		Rru_A2540	0.61	+2.2
2,954,111	-		Rru_A2540	0.61	-0.0
2,954,261	+		Rru_A2540	0.74	+1.0
2,954,261	+		Rru_A2540	0.74	-0.0
2,954,261	+		Rru_A2540	0.74	+0.4
2,954,558	+				+0.6
2,954,558	+				-0.0
2,954,559	-				+1.6
2,954,562	+				+0.7
2,954,562	+				-0.0
2,954,563	-				-1.6
2,954,580	+				+1.6
2,954,967	+		Rru_A2541	0.69	+2.9
2,954,967	+		Rru_A2541	0.69	+2.7
2,954,967	+		Rru_A2541	0.69	+3.1
2,954,967	+		Rru_A2541	0.69	+1.4
2,954,967	+		Rru_A2541	0.69	-0.0
2,954,967	+		Rru_A2541	0.69	+1.3
2,954,968	-		Rru_A2541	0.69	+1.9
2,954,968	-		Rru_A2541	0.69	-0.0
2,954,968	-		Rru_A2541	0.69	+2.8
2,955,150	+				+2.1
2,955,151	-				+2.5
2,955,151	-				+1.0
2,955,151	-				+1.3
2,955,151	-				+0.8
2,955,151	-				+0.9
2,955,151	-				-0.0
2,955,190	-				-0.0
2,955,190	-				+0.4
2,955,190	-				+1.6
2,955,190	-				-1.0
2,955,208	-				+0.6
2,955,215	+				+2.1
2,955,216	-				+1.2