Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2512

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,919,522	+		Rru_A2511	0.62	+1.3
2,919,523	-		Rru_A2511	0.62	+1.8
2,919,523	-		Rru_A2511	0.62	+0.2
2,919,523	-		Rru_A2511	0.62	-0.0
2,919,523	-		Rru_A2511	0.62	+0.3
2,919,523	-		Rru_A2511	0.62	-0.0
2,919,742	+		Rru_A2511	0.73	-0.0
2,919,742	+		Rru_A2511	0.73	-0.0
2,919,743	-		Rru_A2511	0.73	-1.0
2,919,743	-		Rru_A2511	0.73	-0.6
2,919,870	-		Rru_A2511	0.79	-0.0
2,919,883	-		Rru_A2511	0.79	+0.2
2,920,230	+				-0.0
2,920,329	+				+0.4
2,920,329	+				+0.8
2,920,329	+				-1.0
2,920,356	+				-0.0
2,920,357	-				-0.0
2,920,357	-				-0.0
2,920,357	-				-0.0
2,920,357	-				+1.5
2,920,357	-				-0.0
2,920,474	-		Rru_A2512	0.20	+1.5
2,920,599	+		Rru_A2512	0.37	-1.6
2,920,600	-		Rru_A2512	0.37	-0.0
2,920,626	+		Rru_A2512	0.41	-0.0
2,920,626	+		Rru_A2512	0.41	-0.0
2,920,627	-		Rru_A2512	0.41	-0.0
2,920,627	-		Rru_A2512	0.41	+1.0
2,920,627	-		Rru_A2512	0.41	-2.0
2,920,649	-		Rru_A2512	0.44	-0.0
2,920,649	-		Rru_A2512	0.44	-0.8
2,920,969	+		Rru_A2512	0.88	-0.0
2,921,050	+				+1.0
2,921,070	+				-0.0
2,921,070	+				+1.5
2,921,123	-				-0.0
2,921,123	-				+3.4
2,921,147	-				-0.0
2,921,460	-		Rru_A2513	0.18	+1.2
2,921,664	-		Rru_A2513	0.32	+0.9
2,921,703	+		Rru_A2513	0.35	+0.1
2,921,703	+		Rru_A2513	0.35	+1.7
2,921,703	+		Rru_A2513	0.35	+1.9
2,921,704	-		Rru_A2513	0.35	+1.0
2,921,704	-		Rru_A2513	0.35	+1.0
2,921,706	-		Rru_A2513	0.35	+1.4
2,921,706	-		Rru_A2513	0.35	-0.0
2,921,706	-		Rru_A2513	0.35	+0.4
2,921,816	+		Rru_A2513	0.43	+2.3
2,921,830	-		Rru_A2513	0.44	+0.6