Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2472

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,870,054	+		Rru_A2470	0.88	-0.6
2,870,054	+		Rru_A2470	0.88	-1.0
2,870,055	-		Rru_A2470	0.88	+1.3
2,870,075	+		Rru_A2470	0.89	-0.0
2,870,075	+		Rru_A2470	0.89	+0.4
2,870,075	+		Rru_A2470	0.89	-1.0
2,870,075	+		Rru_A2470	0.89	-0.0
2,870,075	+		Rru_A2470	0.89	+1.0
2,870,075	+		Rru_A2470	0.89	+1.3
2,870,075	+		Rru_A2470	0.89	+0.8
2,870,075	+		Rru_A2470	0.89	-0.4
2,870,075	+		Rru_A2470	0.89	+1.5
2,870,076	-		Rru_A2470	0.89	+1.0
2,870,076	-		Rru_A2470	0.89	-0.0
2,870,076	-		Rru_A2470	0.89	+0.5
2,870,076	-		Rru_A2470	0.89	+1.1
2,870,076	-		Rru_A2470	0.89	+0.5
2,870,076	-		Rru_A2470	0.89	-0.0
2,870,076	-		Rru_A2470	0.89	+1.5
2,870,076	-		Rru_A2470	0.89	+1.9
2,870,077	+		Rru_A2470	0.89	+0.8
2,870,077	+		Rru_A2470	0.89	-0.3
2,870,077	+		Rru_A2470	0.89	+1.1
2,870,078	-		Rru_A2470	0.89	-0.0
2,870,078	-		Rru_A2470	0.89	+1.2
2,870,078	-		Rru_A2470	0.89	+1.1
2,870,168	+				+2.5
2,870,189	+				+1.0
2,870,189	+				-0.0
2,870,189	+				+1.5
2,870,189	+				+1.3
2,870,190	-				+1.2
2,870,190	-				-0.0
2,870,236	+				+0.7
2,870,436	+				+1.3
2,870,437	-				+0.7
2,870,437	-				+0.5
2,870,437	-				+1.4
2,870,703	+				-0.0
2,870,753	-				+2.4
2,870,765	-				+2.1
2,870,779	+				-0.2
2,870,779	+				+1.4
2,870,779	+				+1.4
2,870,780	-				-0.4
2,870,965	+		Rru_A2472	0.32	-0.0
2,870,966	-		Rru_A2472	0.32	-0.0
2,871,037	+		Rru_A2472	0.43	-0.0
2,871,043	+		Rru_A2472	0.44	+0.2
2,871,044	-		Rru_A2472	0.44	-0.0
2,871,044	-		Rru_A2472	0.44	-0.4
2,871,044	-		Rru_A2472	0.44	+1.0
2,871,101	-		Rru_A2472	0.53	+0.4
2,871,101	-		Rru_A2472	0.53	-0.3
2,871,101	-		Rru_A2472	0.53	-0.0
2,871,103	+		Rru_A2472	0.54	-0.0
2,871,158	+		Rru_A2472	0.62	-0.1
2,871,159	-		Rru_A2472	0.63	-0.0
2,871,159	-		Rru_A2472	0.63	-0.4
2,871,176	+		Rru_A2472	0.65	+0.4
2,871,177	-		Rru_A2472	0.65	+1.6
2,871,177	-		Rru_A2472	0.65	-0.7
2,871,178	+		Rru_A2472	0.66	-0.0
2,871,178	+		Rru_A2472	0.66	-0.0
2,871,179	-		Rru_A2472	0.66	+0.1
2,871,179	-		Rru_A2472	0.66	-0.2
2,871,558	+				-0.0
2,871,558	+				+0.3
2,871,558	+				-0.2
2,871,562	+				-0.0
2,871,562	+				+0.5
2,871,562	+				-0.0
2,871,563	-				+1.1
2,871,587	+				+1.1
2,871,588	-				-0.6
2,871,588	-				+1.2
2,871,588	-				-0.0
2,871,603	+				+0.9
2,871,763	+				+1.7
2,871,763	+				+0.8
2,871,763	+				+0.6
2,871,764	-				+0.6
2,871,764	-				+0.6
2,871,764	-				-0.5
2,871,764	-				+1.1
2,871,764	-				-0.0
2,871,999	-		Rru_A2473	0.22	+1.5
2,872,064	+		Rru_A2473	0.26	+0.2
2,872,065	-		Rru_A2473	0.26	+1.0
2,872,068	+		Rru_A2473	0.27	+1.2
2,872,068	+		Rru_A2473	0.27	+1.3
2,872,068	+		Rru_A2473	0.27	-0.0
2,872,068	+		Rru_A2473	0.27	+2.6
2,872,068	+		Rru_A2473	0.27	+1.4
2,872,068	+		Rru_A2473	0.27	+0.2
2,872,069	-		Rru_A2473	0.27	-0.0
2,872,069	-		Rru_A2473	0.27	-0.0
2,872,069	-		Rru_A2473	0.27	+0.5
2,872,069	-		Rru_A2473	0.27	+1.8
2,872,069	-		Rru_A2473	0.27	+1.8
2,872,069	-		Rru_A2473	0.27	+1.7
2,872,069	-		Rru_A2473	0.27	+1.1
2,872,069	-		Rru_A2473	0.27	-0.0
2,872,069	-		Rru_A2473	0.27	-0.0
2,872,069	-		Rru_A2473	0.27	-0.0
2,872,069	-		Rru_A2473	0.27	-0.0
2,872,244	+		Rru_A2473	0.37	+0.9
2,872,244	+		Rru_A2473	0.37	-0.0
2,872,245	-		Rru_A2473	0.37	+1.0
2,872,245	-		Rru_A2473	0.37	+0.7
2,872,245	-		Rru_A2473	0.37	-0.0
2,872,245	-		Rru_A2473	0.37	+1.8
2,872,245	-		Rru_A2473	0.37	-0.0
2,872,246	+		Rru_A2473	0.37	+1.2
2,872,246	+		Rru_A2473	0.37	-0.0
2,872,247	-		Rru_A2473	0.37	-1.0
2,872,247	-		Rru_A2473	0.37	+2.0
2,872,247	-		Rru_A2473	0.37	-0.0
2,872,247	-		Rru_A2473	0.37	+1.3
2,872,247	-		Rru_A2473	0.37	-0.0
2,872,280	-		Rru_A2473	0.39	+1.3
2,872,280	-		Rru_A2473	0.39	+1.8