Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2453

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,850,556	+		Rru_A2452	0.30	+0.3
2,850,636	+		Rru_A2452	0.38	-0.0
2,850,636	+		Rru_A2452	0.38	-0.0
2,850,637	-		Rru_A2452	0.38	+1.0
2,850,637	-		Rru_A2452	0.38	+4.4
2,850,637	-		Rru_A2452	0.38	-0.0
2,850,637	-		Rru_A2452	0.38	-0.0
2,850,637	-		Rru_A2452	0.38	-0.0
2,850,638	+		Rru_A2452	0.38	+1.1
2,850,639	-		Rru_A2452	0.39	+1.0
2,850,639	-		Rru_A2452	0.39	+2.3
2,850,639	-		Rru_A2452	0.39	+0.7
2,850,717	+		Rru_A2452	0.47	-0.0
2,850,718	-		Rru_A2452	0.47	-0.0
2,850,795	+		Rru_A2452	0.55	-0.0
2,850,796	-		Rru_A2452	0.55	+0.3
2,850,814	+		Rru_A2452	0.57	+0.7
2,850,815	-		Rru_A2452	0.57	+1.2
2,850,847	+		Rru_A2452	0.60	-0.0
2,850,848	-		Rru_A2452	0.60	-0.0
2,850,848	-		Rru_A2452	0.60	-0.0
2,850,848	-		Rru_A2452	0.60	+0.0
2,850,848	-		Rru_A2452	0.60	+1.1
2,850,894	+		Rru_A2452	0.65	+1.2
2,850,894	+		Rru_A2452	0.65	-0.5
2,850,894	+		Rru_A2452	0.65	-0.0
2,850,895	-		Rru_A2452	0.65	+0.2
2,850,996	+		Rru_A2452	0.76	+0.6
2,850,997	-		Rru_A2452	0.76	-0.0
2,850,997	-		Rru_A2452	0.76	-0.0
2,851,133	+				+3.0
2,851,133	+				+0.8
2,851,445	-				-0.0
2,851,479	+				-0.0
2,851,480	-				+0.8
2,851,480	-				-0.5
2,851,573	+				+1.2
2,851,573	+				+0.3
2,851,573	+				-0.0
2,851,573	+				+1.1
2,851,573	+				+0.5
2,851,573	+				+1.0
2,851,574	-				-0.0
2,852,310	-		Rru_A2453	0.62	-0.0
2,852,310	-		Rru_A2453	0.62	+2.3
2,852,517	+		Rru_A2453	0.79	+0.2
2,852,517	+		Rru_A2453	0.79	+0.3
2,852,517	+		Rru_A2453	0.79	+0.6
2,852,517	+		Rru_A2453	0.79	-1.0
2,852,517	+		Rru_A2453	0.79	+0.5
2,852,517	+		Rru_A2453	0.79	+0.3
2,852,517	+		Rru_A2453	0.79	+0.1
2,852,517	+		Rru_A2453	0.79	-0.0
2,852,587	+		Rru_A2453	0.85	+0.6
2,852,651	+		Rru_A2453	0.90	+1.5
2,852,651	+		Rru_A2453	0.90	-1.0
2,852,651	+		Rru_A2453	0.90	-1.2
2,852,893	+				+1.3
2,852,894	-				+4.1
2,852,894	-				+1.3
2,852,894	-				+1.5
2,852,987	+		Rru_A2454	0.13	+0.9
2,852,987	+		Rru_A2454	0.13	-0.0
2,852,987	+		Rru_A2454	0.13	+0.4
2,852,987	+		Rru_A2454	0.13	+0.1
2,853,096	+		Rru_A2454	0.24	-1.0
2,853,444	+		Rru_A2454	0.60	+1.5
2,853,444	+		Rru_A2454	0.60	+2.0
2,853,444	+		Rru_A2454	0.60	+1.5
2,853,444	+		Rru_A2454	0.60	+0.8
2,853,445	-		Rru_A2454	0.60	+0.7
2,853,520	-		Rru_A2454	0.68	-0.0
2,853,708	+		Rru_A2454	0.87	+1.0