Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2402

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,796,171	+		Rru_A2401	0.15	+0.5
2,796,171	+		Rru_A2401	0.15	-0.3
2,796,172	-		Rru_A2401	0.15	-0.0
2,796,172	-		Rru_A2401	0.15	-1.0
2,796,172	-		Rru_A2401	0.15	+1.4
2,796,172	-		Rru_A2401	0.15	+1.1
2,796,172	-		Rru_A2401	0.15	-0.0
2,796,368	-		Rru_A2401	0.35	-0.0
2,796,663	+		Rru_A2401	0.67	+2.3
2,797,010	-				-1.0
2,797,024	-				-2.9
2,797,822	+				-0.0
2,797,822	+				+1.0
2,797,822	+				+0.5
2,797,823	-				-1.5
2,797,823	-				-0.5
2,797,823	-				-1.8
2,797,823	-				-2.4
2,798,032	+		Rru_A2403	0.19	-0.9
2,798,034	+		Rru_A2403	0.19	-0.0
2,798,241	+		Rru_A2403	0.37	-2.6
2,798,242	-		Rru_A2403	0.38	-2.6
2,798,363	-		Rru_A2403	0.48	-0.3
2,798,363	-		Rru_A2403	0.48	-0.8
2,798,363	-		Rru_A2403	0.48	-0.0
2,798,539	+		Rru_A2403	0.64	-0.0
2,798,539	+		Rru_A2403	0.64	-0.0
2,798,539	+		Rru_A2403	0.64	-1.2
2,798,540	-		Rru_A2403	0.64	-0.0
2,798,540	-		Rru_A2403	0.64	-1.4
2,798,540	-		Rru_A2403	0.64	-0.0
2,798,540	-		Rru_A2403	0.64	-1.0
2,798,540	-		Rru_A2403	0.64	-1.0
2,798,587	+		Rru_A2403	0.69	-2.4
2,798,587	+		Rru_A2403	0.69	-0.6
2,798,587	+		Rru_A2403	0.69	-2.4
2,798,587	+		Rru_A2403	0.69	-0.6
2,798,588	-		Rru_A2403	0.69	-0.0
2,798,588	-		Rru_A2403	0.69	-2.0
2,798,588	-		Rru_A2403	0.69	-1.0
2,798,588	-		Rru_A2403	0.69	-3.0
2,798,588	-		Rru_A2403	0.69	-0.7
2,798,653	+		Rru_A2403	0.75	-1.7
2,798,653	+		Rru_A2403	0.75	-0.0
2,798,653	+		Rru_A2403	0.75	-0.0
2,798,653	+		Rru_A2403	0.75	-0.2
2,798,653	+		Rru_A2403	0.75	-0.0
2,798,653	+		Rru_A2403	0.75	-1.0
2,798,653	+		Rru_A2403	0.75	-0.0
2,798,653	+		Rru_A2403	0.75	-0.0
2,798,654	-		Rru_A2403	0.75	-0.0
2,798,654	-		Rru_A2403	0.75	+1.5
2,798,654	-		Rru_A2403	0.75	-2.0
2,798,654	-		Rru_A2403	0.75	-0.0
2,798,654	-		Rru_A2403	0.75	-0.0
2,798,654	-		Rru_A2403	0.75	+1.0
2,798,654	-		Rru_A2403	0.75	-0.3
2,798,654	-		Rru_A2403	0.75	-2.6
2,798,654	-		Rru_A2403	0.75	-2.6
2,798,654	-		Rru_A2403	0.75	-1.6
2,798,654	-		Rru_A2403	0.75	-0.0
2,798,654	-		Rru_A2403	0.75	-0.0
2,798,654	-		Rru_A2403	0.75	-0.7
2,798,710	+		Rru_A2403	0.80	-0.0
2,798,710	+		Rru_A2403	0.80	-0.0
2,798,710	+		Rru_A2403	0.80	-0.7
2,798,711	-		Rru_A2403	0.80	+0.4
2,798,711	-		Rru_A2403	0.80	-1.0