Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2379

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,769,899	+				+1.5
2,769,954	+		Rru_A2378	0.15	+1.1
2,770,004	+		Rru_A2378	0.25	+1.0
2,770,152	-		Rru_A2378	0.53	-1.0
2,770,233	+		Rru_A2378	0.68	-1.0
2,770,237	-		Rru_A2378	0.69	+1.2
2,770,301	+		Rru_A2378	0.81	-0.0
2,770,302	-		Rru_A2378	0.82	+0.8
2,770,302	-		Rru_A2378	0.82	+1.0
2,770,305	+		Rru_A2378	0.82	+1.3
2,770,306	-		Rru_A2378	0.82	+1.8
2,770,319	-		Rru_A2378	0.85	-0.5
2,770,319	-		Rru_A2378	0.85	-0.0
2,770,319	-		Rru_A2378	0.85	-1.0
2,770,437	+				+1.0
2,770,438	-				-0.4
2,770,571	-				-0.0
2,770,628	+				-0.6
2,770,628	+				-0.0
2,770,629	-				-0.0
2,770,746	+				-0.0
2,770,747	-				+2.7
2,770,754	+				+0.8
2,770,802	-				-0.0
2,770,808	-				+0.8
2,770,808	-				+1.0
2,770,815	-				+1.2
2,770,864	+				-0.0
2,771,210	-		Rru_A2379	0.34	+0.9
2,771,210	-		Rru_A2379	0.34	+1.4
2,771,210	-		Rru_A2379	0.34	-0.0
2,771,288	+		Rru_A2379	0.42	-0.0
2,771,288	+		Rru_A2379	0.42	+2.0
2,771,288	+		Rru_A2379	0.42	-0.0
2,771,288	+		Rru_A2379	0.42	+1.0
2,771,288	+		Rru_A2379	0.42	-2.3
2,771,471	+		Rru_A2379	0.60	+0.4
2,771,471	+		Rru_A2379	0.60	+1.7
2,771,471	+		Rru_A2379	0.60	-0.0
2,771,471	+		Rru_A2379	0.60	+2.1
2,771,474	-		Rru_A2379	0.60	-0.0
2,771,474	-		Rru_A2379	0.60	+0.5
2,771,474	-		Rru_A2379	0.60	+1.3
2,771,482	+		Rru_A2379	0.61	-0.0
2,771,482	+		Rru_A2379	0.61	+1.0
2,771,482	+		Rru_A2379	0.61	+0.9
2,771,799	+				-0.0
2,771,799	+				+0.8
2,771,800	-				+1.6
2,771,800	-				+0.5
2,771,822	+				+0.7
2,771,954	+				-0.3
2,771,954	+				-0.3
2,771,954	+				+2.7
2,771,954	+				+0.8
2,771,954	+				-0.0
2,771,954	+				+1.1
2,771,962	+				+0.4
2,771,962	+				+0.7
2,771,962	+				+2.0
2,771,979	+				+1.0
2,772,187	-		Rru_A2380	0.15	-1.0
2,772,187	-		Rru_A2380	0.15	+0.5
2,772,188	+		Rru_A2380	0.15	+0.4
2,772,542	+		Rru_A2380	0.44	+1.1
2,772,543	-		Rru_A2380	0.44	+2.0
2,772,543	-		Rru_A2380	0.44	-0.0
2,772,543	-		Rru_A2380	0.44	+0.8
2,772,543	-		Rru_A2380	0.44	-0.0