Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2363

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,752,627	+				+1.0
2,752,633	+				+1.2
2,752,633	+				+1.5
2,752,634	-				-0.0
2,752,868	-				+2.3
2,752,868	-				-0.0
2,752,933	+				-0.0
2,752,997	+				+1.2
2,752,998	-				+0.3
2,752,998	-				+2.0
2,752,998	-				-0.0
2,752,998	-				+0.9
2,753,045	+		Rru_A2362	0.10	-0.0
2,753,045	+		Rru_A2362	0.10	+0.9
2,753,046	-		Rru_A2362	0.10	+0.8
2,753,046	-		Rru_A2362	0.10	+0.2
2,753,046	-		Rru_A2362	0.10	-0.0
2,753,046	-		Rru_A2362	0.10	+1.0
2,753,057	+		Rru_A2362	0.13	-0.0
2,753,057	+		Rru_A2362	0.13	-1.6
2,753,058	-		Rru_A2362	0.13	-0.0
2,753,058	-		Rru_A2362	0.13	-0.0
2,753,183	+		Rru_A2362	0.39	+1.1
2,753,201	+		Rru_A2362	0.42	-0.0
2,753,202	-		Rru_A2362	0.43	-0.0
2,753,282	+		Rru_A2362	0.59	-0.0
2,753,283	-		Rru_A2362	0.59	-0.0
2,753,303	+		Rru_A2362	0.64	+1.1
2,753,303	+		Rru_A2362	0.64	-0.0
2,753,303	+		Rru_A2362	0.64	+0.5
2,753,303	+		Rru_A2362	0.64	+1.5
2,753,304	-		Rru_A2362	0.64	+2.0
2,753,304	-		Rru_A2362	0.64	-0.0
2,753,304	-		Rru_A2362	0.64	-0.0
2,753,357	+		Rru_A2362	0.75	+3.4
2,753,357	+		Rru_A2362	0.75	+1.0
2,753,358	-		Rru_A2362	0.75	-0.0
2,753,358	-		Rru_A2362	0.75	-0.0
2,753,358	-		Rru_A2362	0.75	-1.3
2,753,385	+		Rru_A2362	0.81	+1.3
2,753,385	+		Rru_A2362	0.81	+0.9
2,753,386	-		Rru_A2362	0.81	-0.0
2,753,387	+		Rru_A2362	0.81	+0.7
2,753,709	+		Rru_A2363	0.23	-1.0
2,753,710	-		Rru_A2363	0.23	-0.0
2,753,958	+		Rru_A2363	0.55	-0.0
2,753,959	-		Rru_A2363	0.55	-1.0
2,754,013	+		Rru_A2363	0.62	-0.9
2,754,013	+		Rru_A2363	0.62	-0.0
2,754,013	+		Rru_A2363	0.62	-0.0
2,754,013	+		Rru_A2363	0.62	-0.0
2,754,013	+		Rru_A2363	0.62	-0.0
2,754,013	+		Rru_A2363	0.62	-1.0
2,754,013	+		Rru_A2363	0.62	-1.0
2,754,013	+		Rru_A2363	0.62	-0.0
2,754,013	+		Rru_A2363	0.62	-0.0
2,754,014	-		Rru_A2363	0.62	-0.0
2,754,014	-		Rru_A2363	0.62	-1.0
2,754,014	-		Rru_A2363	0.62	-3.0
2,754,014	-		Rru_A2363	0.62	-0.0
2,754,014	-		Rru_A2363	0.62	-1.0
2,754,014	-		Rru_A2363	0.62	-1.0
2,754,014	-		Rru_A2363	0.62	-0.0
2,754,067	+		Rru_A2363	0.69	-0.0
2,754,067	+		Rru_A2363	0.69	-0.0
2,754,067	+		Rru_A2363	0.69	-0.0
2,754,067	+		Rru_A2363	0.69	-0.0
2,754,067	+		Rru_A2363	0.69	-0.0
2,754,067	+		Rru_A2363	0.69	-0.0
2,754,068	-		Rru_A2363	0.70	-0.0
2,754,068	-		Rru_A2363	0.70	-0.0
2,754,235	+				-0.0
2,754,235	+				-0.0
2,754,236	-				-0.0
2,754,236	-				-0.0
2,754,236	-				-0.0
2,754,237	+				-0.0
2,754,237	+				-1.9
2,754,237	+				-0.0
2,754,237	+				-0.0
2,754,237	+				-0.0
2,754,238	-				-0.0
2,754,238	-				-0.0
2,754,238	-				-0.0
2,754,238	-				-0.0
2,754,414	+				-2.4
2,754,415	-				+1.2
2,754,415	-				-0.0
2,754,441	+				-0.0
2,754,441	+				-2.1
2,754,441	+				-1.0
2,754,442	-				+1.9
2,754,442	-				+2.0
2,754,442	-				-0.0
2,754,442	-				+3.0
2,754,538	-		Rru_A2364	0.38	+2.6
2,754,544	+		Rru_A2364	0.40	+0.6
2,754,544	+		Rru_A2364	0.40	-0.2
2,754,545	-		Rru_A2364	0.40	+1.6
2,754,546	+		Rru_A2364	0.40	-0.6
2,754,546	+		Rru_A2364	0.40	-0.0
2,754,546	+		Rru_A2364	0.40	-1.7
2,754,546	+		Rru_A2364	0.40	-0.0
2,754,546	+		Rru_A2364	0.40	+0.2
2,754,547	-		Rru_A2364	0.41	-0.0
2,754,547	-		Rru_A2364	0.41	-1.0
2,754,547	-		Rru_A2364	0.41	+1.2
2,754,579	+		Rru_A2364	0.50	-1.6
2,754,579	+		Rru_A2364	0.50	-0.0
2,754,580	-		Rru_A2364	0.51	+1.4
2,754,580	-		Rru_A2364	0.51	+1.6
2,754,580	-		Rru_A2364	0.51	+0.9
2,754,580	-		Rru_A2364	0.51	-1.0
2,754,580	-		Rru_A2364	0.51	-0.0
2,754,627	+		Rru_A2364	0.65	-2.2
2,754,688	-		Rru_A2364	0.83	+1.5
2,754,721	-				-0.0
2,754,760	+				+1.0
2,754,761	-				-0.0
2,754,856	+				-0.4
2,754,857	-				-0.0
2,754,970	-				+1.0
2,755,078	-				-0.0