Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2337

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,705,650	+		Rru_A2336	0.25	-0.1
2,705,650	+		Rru_A2336	0.25	+0.3
2,705,899	+		Rru_A2336	0.45	+1.1
2,706,037	+		Rru_A2336	0.56	-0.1
2,706,115	+		Rru_A2336	0.62	+1.1
2,706,115	+		Rru_A2336	0.62	+0.8
2,706,116	-		Rru_A2336	0.62	+1.6
2,706,116	-		Rru_A2336	0.62	-0.1
2,706,116	-		Rru_A2336	0.62	-0.1
2,706,116	-		Rru_A2336	0.62	+0.4
2,706,283	+		Rru_A2336	0.75	+1.2
2,706,283	+		Rru_A2336	0.75	+1.3
2,706,284	-		Rru_A2336	0.75	-0.1
2,706,284	-		Rru_A2336	0.75	+1.0
2,706,284	-		Rru_A2336	0.75	-0.1
2,706,284	-		Rru_A2336	0.75	-0.1
2,706,457	+		Rru_A2336	0.89	+1.2
2,706,457	+		Rru_A2336	0.89	-0.1
2,706,458	-		Rru_A2336	0.89	-0.3
2,706,458	-		Rru_A2336	0.89	+1.9
2,706,458	-		Rru_A2336	0.89	+0.9
2,706,553	+				-0.1
2,706,553	+				-1.6
2,706,770	+				-0.1
2,706,771	-				+1.9
2,706,772	+				+0.1
2,706,773	-				+1.2
2,706,807	+				+0.8
2,706,837	-				+1.4
2,706,872	+		Rru_A2337	0.10	-0.0
2,706,872	+		Rru_A2337	0.10	+0.7
2,706,872	+		Rru_A2337	0.10	-0.0
2,706,872	+		Rru_A2337	0.10	+1.5
2,706,872	+		Rru_A2337	0.10	+1.2
2,706,872	+		Rru_A2337	0.10	-0.0
2,706,873	-		Rru_A2337	0.10	-0.0
2,706,873	-		Rru_A2337	0.10	+0.8
2,706,873	-		Rru_A2337	0.10	+0.6
2,706,879	-		Rru_A2337	0.11	+0.4
2,707,052	+		Rru_A2337	0.19	+1.0
2,707,053	-		Rru_A2337	0.19	+3.0
2,707,053	-		Rru_A2337	0.19	-0.0
2,707,053	-		Rru_A2337	0.19	-0.9
2,707,175	+		Rru_A2337	0.24	+0.4
2,707,175	+		Rru_A2337	0.24	+1.1
2,707,175	+		Rru_A2337	0.24	+1.2
2,707,175	+		Rru_A2337	0.24	+0.6
2,707,175	+		Rru_A2337	0.24	+2.0
2,707,176	-		Rru_A2337	0.24	-0.0
2,707,176	-		Rru_A2337	0.24	+0.4
2,707,176	-		Rru_A2337	0.24	+0.3
2,707,176	-		Rru_A2337	0.24	+0.5
2,707,176	-		Rru_A2337	0.24	+1.3
2,707,176	-		Rru_A2337	0.24	-1.0
2,707,266	-		Rru_A2337	0.28	-0.5
2,707,266	-		Rru_A2337	0.28	+3.4
2,707,266	-		Rru_A2337	0.28	+1.7
2,707,284	-		Rru_A2337	0.29	-0.0
2,707,310	+		Rru_A2337	0.30	-1.0
2,707,310	+		Rru_A2337	0.30	+0.6
2,707,311	-		Rru_A2337	0.30	+1.2
2,707,311	-		Rru_A2337	0.30	-0.0
2,707,311	-		Rru_A2337	0.30	-0.0
2,707,334	+		Rru_A2337	0.31	+1.8
2,707,356	-		Rru_A2337	0.32	-0.0
2,707,356	-		Rru_A2337	0.32	-0.0
2,707,359	+		Rru_A2337	0.32	+1.0
2,707,359	+		Rru_A2337	0.32	-0.0
2,707,359	+		Rru_A2337	0.32	-0.0
2,707,382	+		Rru_A2337	0.33	+1.0
2,707,382	+		Rru_A2337	0.33	-0.5
2,707,460	+		Rru_A2337	0.37	+2.5
2,707,461	-		Rru_A2337	0.37	+2.5
2,707,461	-		Rru_A2337	0.37	-0.0
2,707,461	-		Rru_A2337	0.37	+0.2
2,707,472	+		Rru_A2337	0.37	-0.0
2,707,472	+		Rru_A2337	0.37	+1.1
2,707,472	+		Rru_A2337	0.37	+1.0
2,707,472	+		Rru_A2337	0.37	-0.0
2,707,480	-		Rru_A2337	0.38	+1.4
2,707,492	-		Rru_A2337	0.38	-0.0
2,707,550	+		Rru_A2337	0.41	+0.5
2,707,550	+		Rru_A2337	0.41	+1.1
2,707,551	-		Rru_A2337	0.41	-0.0
2,707,551	-		Rru_A2337	0.41	-1.0
2,707,656	-		Rru_A2337	0.46	+0.4
2,707,761	-		Rru_A2337	0.50	-0.0
2,707,822	-		Rru_A2337	0.53	+1.9
2,707,825	-		Rru_A2337	0.53	-1.0
2,707,826	+		Rru_A2337	0.53	+1.1
2,707,826	+		Rru_A2337	0.53	+0.4
2,707,925	+		Rru_A2337	0.58	+1.0
2,707,965	-		Rru_A2337	0.60	+0.9
2,708,127	-		Rru_A2337	0.67	-1.6
2,708,132	+		Rru_A2337	0.67	+0.9
2,708,133	-		Rru_A2337	0.67	+1.4
2,708,241	-		Rru_A2337	0.72	+2.4
2,708,241	-		Rru_A2337	0.72	+2.5
2,708,241	-		Rru_A2337	0.72	+1.7
2,708,385	+		Rru_A2337	0.78	+0.5
2,708,544	-		Rru_A2337	0.86	+1.0
2,708,544	-		Rru_A2337	0.86	-0.2
2,708,802	-				-0.0
2,708,852	+				-0.0
2,708,869	+				+1.8
2,708,869	+				+0.3
2,708,870	-				-0.0
2,709,044	+				-0.0
2,709,200	-				+0.9
2,709,206	+				+1.3
2,709,212	+				+1.1
2,709,246	+				-0.0
2,709,489	+				-0.0
2,709,552	+				-0.0
2,709,552	+				+1.1
2,709,553	-				-0.1
2,709,553	-				-0.0
2,709,553	-				+1.1
2,709,553	-				-1.0
2,709,553	-				+0.1
2,709,588	+		Rru_A2338	0.12	+1.4
2,709,589	-		Rru_A2338	0.13	-0.0
2,709,594	+		Rru_A2338	0.13	+1.3
2,709,594	+		Rru_A2338	0.13	+0.6
2,709,644	+		Rru_A2338	0.18	-0.2
2,709,644	+		Rru_A2338	0.18	+2.8
2,709,644	+		Rru_A2338	0.18	-0.0
2,709,644	+		Rru_A2338	0.18	+1.0
2,709,644	+		Rru_A2338	0.18	-0.0
2,709,645	-		Rru_A2338	0.19	+1.6
2,709,704	-		Rru_A2338	0.25	+1.5