Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2308

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,670,838	+		Rru_A2307	0.45	+0.6
2,670,864	+		Rru_A2307	0.47	+0.3
2,670,927	+		Rru_A2307	0.51	+1.0
2,670,927	+		Rru_A2307	0.51	+0.5
2,670,927	+		Rru_A2307	0.51	-0.1
2,670,927	+		Rru_A2307	0.51	+1.2
2,670,928	-		Rru_A2307	0.51	-0.1
2,670,928	-		Rru_A2307	0.51	-0.1
2,670,928	-		Rru_A2307	0.51	+2.3
2,670,928	-		Rru_A2307	0.51	+2.2
2,671,050	+		Rru_A2307	0.60	-0.1
2,671,050	+		Rru_A2307	0.60	-1.1
2,671,051	-		Rru_A2307	0.61	+1.0
2,671,051	-		Rru_A2307	0.61	+0.8
2,671,144	-		Rru_A2307	0.67	-0.1
2,671,144	-		Rru_A2307	0.67	-0.1
2,671,149	+		Rru_A2307	0.68	-0.1
2,671,149	+		Rru_A2307	0.68	+0.4
2,671,149	+		Rru_A2307	0.68	+0.3
2,671,149	+		Rru_A2307	0.68	-0.1
2,671,150	-		Rru_A2307	0.68	-0.1
2,671,245	+		Rru_A2307	0.75	-0.1
2,671,246	-		Rru_A2307	0.75	+1.3
2,671,246	-		Rru_A2307	0.75	+1.8
2,671,269	+		Rru_A2307	0.77	-1.1
2,671,269	+		Rru_A2307	0.77	+0.8
2,671,269	+		Rru_A2307	0.77	-0.1
2,671,317	+		Rru_A2307	0.80	-2.1
2,671,317	+		Rru_A2307	0.80	+1.5
2,671,776	+				-0.3
2,671,776	+				+2.5
2,671,776	+				-0.1
2,671,776	+				-0.1
2,671,777	-				-0.4
2,671,833	+		Rru_A2308	0.26	+0.7
2,671,833	+		Rru_A2308	0.26	-1.5
2,671,834	-		Rru_A2308	0.26	-0.9
2,671,943	+		Rru_A2308	0.59	+0.9
2,672,130	+				+1.1
2,672,131	-				-0.1
2,672,338	-				-0.1
2,672,338	-				+0.9
2,672,338	-				+1.1
2,672,520	-		Rru_A2309	0.20	+1.4
2,672,520	-		Rru_A2309	0.20	-0.1
2,672,520	-		Rru_A2309	0.20	-1.1
2,672,520	-		Rru_A2309	0.20	-1.1
2,673,030	+		Rru_A2309	0.50	+1.1
2,673,030	+		Rru_A2309	0.50	-0.1
2,673,031	-		Rru_A2309	0.50	+0.5
2,673,031	-		Rru_A2309	0.50	-0.1
2,673,031	-		Rru_A2309	0.50	+1.1
2,673,031	-		Rru_A2309	0.50	-1.1
2,673,031	-		Rru_A2309	0.50	+1.2
2,673,031	-		Rru_A2309	0.50	+1.0
2,673,031	-		Rru_A2309	0.50	+4.9