Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2299

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,659,281	+		Rru_A2298	0.13	+1.7
2,659,383	+		Rru_A2298	0.23	-1.1
2,659,383	+		Rru_A2298	0.23	+1.0
2,659,390	+		Rru_A2298	0.23	+1.6
2,659,466	-		Rru_A2298	0.30	+1.8
2,659,467	+		Rru_A2298	0.30	+1.1
2,659,467	+		Rru_A2298	0.30	+0.0
2,659,467	+		Rru_A2298	0.30	+1.0
2,659,468	-		Rru_A2298	0.30	-0.5
2,659,468	-		Rru_A2298	0.30	-0.1
2,659,468	-		Rru_A2298	0.30	-0.1
2,659,489	-		Rru_A2298	0.32	+1.0
2,659,680	+		Rru_A2298	0.50	+2.9
2,659,680	+		Rru_A2298	0.50	-0.1
2,659,680	+		Rru_A2298	0.50	+1.5
2,659,680	+		Rru_A2298	0.50	-0.1
2,659,680	+		Rru_A2298	0.50	+1.5
2,659,680	+		Rru_A2298	0.50	+1.5
2,659,680	+		Rru_A2298	0.50	-0.2
2,659,680	+		Rru_A2298	0.50	+2.6
2,659,680	+		Rru_A2298	0.50	-0.1
2,659,681	-		Rru_A2298	0.50	-1.1
2,659,681	-		Rru_A2298	0.50	-0.4
2,659,681	-		Rru_A2298	0.50	+0.9
2,659,681	-		Rru_A2298	0.50	+0.2
2,659,681	-		Rru_A2298	0.50	-0.1
2,659,681	-		Rru_A2298	0.50	+1.2
2,659,681	-		Rru_A2298	0.50	+0.7
2,659,681	-		Rru_A2298	0.50	-1.6
2,659,748	-		Rru_A2298	0.56	+0.4
2,659,803	+		Rru_A2298	0.61	+2.0
2,659,804	-		Rru_A2298	0.61	+2.1
2,659,804	-		Rru_A2298	0.61	+0.4
2,659,830	+		Rru_A2298	0.63	+0.0
2,659,831	-		Rru_A2298	0.63	-0.1
2,659,971	+		Rru_A2298	0.76	+1.9
2,659,971	+		Rru_A2298	0.76	+1.6
2,659,971	+		Rru_A2298	0.76	+1.4
2,659,971	+		Rru_A2298	0.76	+1.5
2,659,971	+		Rru_A2298	0.76	+1.6
2,659,971	+		Rru_A2298	0.76	-1.4
2,659,972	-		Rru_A2298	0.76	-0.4
2,659,972	-		Rru_A2298	0.76	-0.1
2,659,972	-		Rru_A2298	0.76	+0.9
2,659,972	-		Rru_A2298	0.76	-0.5
2,660,014	+		Rru_A2298	0.80	+0.7
2,660,014	+		Rru_A2298	0.80	-0.3
2,660,015	-		Rru_A2298	0.80	-0.1
2,660,215	+				-0.1
2,660,480	+		Rru_A2299	0.22	+1.2
2,660,480	+		Rru_A2299	0.22	-0.1
2,660,480	+		Rru_A2299	0.22	+1.4
2,660,481	-		Rru_A2299	0.22	-0.1
2,660,493	-		Rru_A2299	0.23	-0.1
2,660,567	+		Rru_A2299	0.30	+0.9
2,660,567	+		Rru_A2299	0.30	+1.6
2,660,567	+		Rru_A2299	0.30	+1.5
2,660,568	-		Rru_A2299	0.30	+0.6
2,660,568	-		Rru_A2299	0.30	-0.1
2,660,568	-		Rru_A2299	0.30	+1.2
2,660,568	-		Rru_A2299	0.30	-0.5
2,660,574	-		Rru_A2299	0.31	+1.9
2,660,574	-		Rru_A2299	0.31	-0.1
2,661,085	+		Rru_A2299	0.82	+1.5
2,661,110	+		Rru_A2299	0.84	+0.2
2,661,110	+		Rru_A2299	0.84	-0.1
2,661,111	-		Rru_A2299	0.84	-0.5
2,661,111	-		Rru_A2299	0.84	-0.1
2,661,132	-		Rru_A2299	0.86	+1.3
2,661,134	+		Rru_A2299	0.86	+0.9
2,661,135	-		Rru_A2299	0.87	+1.7
2,661,147	+		Rru_A2299	0.88	+0.7
2,661,147	+		Rru_A2299	0.88	+0.2
2,661,595	+		Rru_A2300	0.32	+2.8
2,661,596	-		Rru_A2300	0.32	-0.1
2,661,667	+		Rru_A2300	0.39	+1.9
2,661,667	+		Rru_A2300	0.39	+0.4
2,661,667	+		Rru_A2300	0.39	+1.9
2,661,667	+		Rru_A2300	0.39	+2.1
2,661,667	+		Rru_A2300	0.39	-0.1
2,661,667	+		Rru_A2300	0.39	-0.1
2,661,667	+		Rru_A2300	0.39	+1.7
2,661,667	+		Rru_A2300	0.39	+1.9
2,661,667	+		Rru_A2300	0.39	+1.0
2,661,667	+		Rru_A2300	0.39	+1.3
2,661,667	+		Rru_A2300	0.39	+0.5
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,668	-		Rru_A2300	0.39	-0.2
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,668	-		Rru_A2300	0.39	+0.5
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,689	+		Rru_A2300	0.41	+2.2
2,661,690	-		Rru_A2300	0.41	+1.4
2,661,730	+		Rru_A2300	0.46	+1.0
2,661,730	+		Rru_A2300	0.46	+1.4
2,661,730	+		Rru_A2300	0.46	+1.8
2,661,757	+		Rru_A2300	0.48	+1.3
2,661,757	+		Rru_A2300	0.48	-0.1
2,661,757	+		Rru_A2300	0.48	-0.1
2,661,888	-		Rru_A2300	0.62	-0.1
2,661,888	-		Rru_A2300	0.62	-0.1
2,662,042	+		Rru_A2300	0.77	+1.5
2,662,042	+		Rru_A2300	0.77	+1.5
2,662,042	+		Rru_A2300	0.77	+0.9
2,662,042	+		Rru_A2300	0.77	+1.0
2,662,042	+		Rru_A2300	0.77	+1.8
2,662,042	+		Rru_A2300	0.77	-0.1
2,662,042	+		Rru_A2300	0.77	+1.1
2,662,043	-		Rru_A2300	0.78	-0.1
2,662,043	-		Rru_A2300	0.78	-1.0
2,662,043	-		Rru_A2300	0.78	+0.9
2,662,043	-		Rru_A2300	0.78	+0.9
2,662,163	+		Rru_A2300	0.90	+1.2
2,662,164	-		Rru_A2300	0.90	+0.8
2,662,164	-		Rru_A2300	0.90	+0.6