Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2265

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,624,379	+		Rru_A2263	0.89	-0.1
2,624,463	+				+0.4
2,624,463	+				+2.5
2,624,464	-				+1.3
2,624,464	-				+1.4
2,624,464	-				-0.1
2,624,554	+				-0.1
2,624,582	+				+0.4
2,624,582	+				-0.1
2,624,702	-				-0.1
2,624,894	+				+1.5
2,624,946	+				-0.1
2,624,947	-				+1.9
2,625,094	+		Rru_A2264	0.50	-0.1
2,625,095	-		Rru_A2264	0.50	+2.4
2,625,095	-		Rru_A2264	0.50	-0.1
2,625,205	+		Rru_A2264	0.88	+3.2
2,625,206	-		Rru_A2264	0.88	-0.1
2,625,387	+		Rru_A2265	0.12	-0.1
2,625,436	+		Rru_A2265	0.16	+3.7
2,625,436	+		Rru_A2265	0.16	+3.2
2,625,437	-		Rru_A2265	0.16	+3.5
2,625,437	-		Rru_A2265	0.16	+1.8
2,625,438	+		Rru_A2265	0.16	-0.1
2,625,438	+		Rru_A2265	0.16	-0.1
2,625,438	+		Rru_A2265	0.16	+3.4
2,625,439	-		Rru_A2265	0.16	-0.1
2,625,439	-		Rru_A2265	0.16	+4.2
2,625,439	-		Rru_A2265	0.16	+3.3
2,625,439	-		Rru_A2265	0.16	+2.7
2,625,670	-		Rru_A2265	0.34	+6.1
2,625,845	-		Rru_A2265	0.47	+2.2
2,625,845	-		Rru_A2265	0.47	-0.1
2,625,846	+		Rru_A2265	0.47	-0.1
2,626,071	+		Rru_A2265	0.65	-0.1
2,626,071	+		Rru_A2265	0.65	+1.9
2,626,072	-		Rru_A2265	0.65	+1.9
2,626,072	-		Rru_A2265	0.65	+3.0
2,626,072	-		Rru_A2265	0.65	-0.1
2,626,227	+		Rru_A2265	0.77	+0.9
2,626,228	-		Rru_A2265	0.77	-0.1
2,626,228	-		Rru_A2265	0.77	+2.0
2,626,281	+		Rru_A2265	0.81	+3.8
2,626,281	+		Rru_A2265	0.81	+2.7
2,626,281	+		Rru_A2265	0.81	+3.5
2,626,281	+		Rru_A2265	0.81	+3.1
2,626,282	-		Rru_A2265	0.81	-1.1
2,626,282	-		Rru_A2265	0.81	+0.9
2,626,282	-		Rru_A2265	0.81	+2.5
2,626,282	-		Rru_A2265	0.81	+2.5
2,626,282	-		Rru_A2265	0.81	+2.8
2,626,383	+		Rru_A2265	0.89	-0.1
2,626,384	-		Rru_A2265	0.89	-0.1
2,626,470	+				+3.9
2,626,470	+				+2.4
2,626,471	-				+2.8
2,626,471	-				+4.5
2,626,471	-				+2.7
2,626,511	+				+5.7
2,626,511	+				+2.1
2,626,511	+				-0.1
2,626,511	+				+2.8
2,626,511	+				+2.7
2,626,511	+				+2.9
2,626,512	-				+3.0
2,626,512	-				+3.3
2,626,512	-				+3.2
2,626,512	-				-0.1
2,626,512	-				+2.7
2,626,512	-				+2.7
2,626,675	+		Rru_A2266	0.11	+0.3
2,626,675	+		Rru_A2266	0.11	+2.1
2,626,693	+		Rru_A2266	0.13	-0.1
2,626,751	-		Rru_A2266	0.18	+3.2
2,626,752	+		Rru_A2266	0.18	+3.2
2,626,752	+		Rru_A2266	0.18	+2.8
2,626,752	+		Rru_A2266	0.18	+3.1
2,626,752	+		Rru_A2266	0.18	-0.1
2,626,752	+		Rru_A2266	0.18	+3.4
2,626,752	+		Rru_A2266	0.18	+2.9
2,626,753	-		Rru_A2266	0.18	+3.2
2,626,753	-		Rru_A2266	0.18	-1.1
2,626,753	-		Rru_A2266	0.18	-0.1
2,626,753	-		Rru_A2266	0.18	+3.3
2,626,753	-		Rru_A2266	0.18	+1.9
2,626,753	-		Rru_A2266	0.18	+2.7
2,626,753	-		Rru_A2266	0.18	+2.4
2,626,753	-		Rru_A2266	0.18	+3.0
2,626,753	-		Rru_A2266	0.18	-0.1
2,626,753	-		Rru_A2266	0.18	+3.9
2,626,753	-		Rru_A2266	0.18	-0.1
2,626,753	-		Rru_A2266	0.18	+3.1
2,626,842	+		Rru_A2266	0.27	+2.6
2,626,842	+		Rru_A2266	0.27	+3.1
2,626,843	-		Rru_A2266	0.27	+2.9
2,626,843	-		Rru_A2266	0.27	+4.1
2,626,936	-		Rru_A2266	0.35	+0.9
2,626,936	-		Rru_A2266	0.35	+3.1
2,626,964	-		Rru_A2266	0.38	+3.3
2,627,125	+		Rru_A2266	0.52	+2.0
2,627,125	+		Rru_A2266	0.52	-1.1
2,627,126	-		Rru_A2266	0.52	+3.2
2,627,293	+		Rru_A2266	0.68	+2.3
2,627,293	+		Rru_A2266	0.68	+1.4
2,627,293	+		Rru_A2266	0.68	-0.1
2,627,293	+		Rru_A2266	0.68	+3.8
2,627,294	-		Rru_A2266	0.68	+3.2
2,627,294	-		Rru_A2266	0.68	-0.1
2,627,294	-		Rru_A2266	0.68	+3.8
2,627,329	-		Rru_A2266	0.71	+2.5
2,627,373	+		Rru_A2266	0.75	-0.1
2,627,373	+		Rru_A2266	0.75	+2.9
2,627,373	+		Rru_A2266	0.75	+2.4
2,627,373	+		Rru_A2266	0.75	-0.1
2,627,391	+		Rru_A2266	0.77	+2.1
2,627,391	+		Rru_A2266	0.77	-0.1
2,627,391	+		Rru_A2266	0.77	+1.8
2,627,391	+		Rru_A2266	0.77	+2.6
2,627,392	-		Rru_A2266	0.77	-0.1
2,627,392	-		Rru_A2266	0.77	+1.4
2,627,419	+		Rru_A2266	0.79	-0.1