Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2256

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,616,635	-				-0.1
2,616,635	-				+1.5
2,616,724	+		Rru_A2255	0.14	+0.9
2,616,725	-		Rru_A2255	0.14	-0.1
2,616,725	-		Rru_A2255	0.14	+0.4
2,616,725	-		Rru_A2255	0.14	+0.8
2,616,959	-		Rru_A2255	0.50	+1.7
2,617,141	+		Rru_A2255	0.77	+0.9
2,617,142	-		Rru_A2255	0.77	+1.1
2,617,211	+		Rru_A2255	0.88	+0.4
2,617,212	-		Rru_A2255	0.88	+1.5
2,617,212	-		Rru_A2255	0.88	+1.7
2,617,212	-		Rru_A2255	0.88	+0.7
2,617,212	-		Rru_A2255	0.88	-0.1
2,617,329	+				+1.0
2,617,329	+				+1.0
2,617,329	+				+1.3
2,617,329	+				+2.0
2,617,330	-				+1.9
2,617,330	-				+0.7
2,617,437	+				+0.8
2,617,437	+				-0.1
2,617,437	+				+0.9
2,617,438	-				+1.0
2,617,438	-				+0.2
2,617,441	+				-0.1
2,617,441	+				-0.1
2,617,441	+				+1.2
2,617,442	-				+0.9
2,617,442	-				-0.1
2,617,442	-				-1.1
2,617,442	-				+2.1
2,617,442	-				+0.4
2,617,458	-				+0.8
2,617,610	+		Rru_A2256	0.18	-0.1
2,617,610	+		Rru_A2256	0.18	-0.5
2,617,611	-		Rru_A2256	0.18	+1.4
2,617,652	+		Rru_A2256	0.27	+1.1
2,617,652	+		Rru_A2256	0.27	+0.7
2,617,652	+		Rru_A2256	0.27	-0.1
2,617,653	-		Rru_A2256	0.27	+1.0
2,617,653	-		Rru_A2256	0.27	-0.5
2,617,653	-		Rru_A2256	0.27	+1.2
2,617,653	-		Rru_A2256	0.27	+0.8
2,617,653	-		Rru_A2256	0.27	+1.4
2,617,653	-		Rru_A2256	0.27	-0.1
2,617,973	+				+0.9
2,617,974	-				+1.9
2,618,102	+				+0.8
2,618,102	+				+1.3
2,618,182	+				+1.9
2,618,187	+				-1.1
2,618,187	+				-0.1
2,618,188	-				+0.6
2,618,188	-				+0.8
2,618,188	-				+0.5
2,618,189	+				+2.5
2,618,189	+				+0.4
2,618,189	+				-0.1
2,618,190	-				+1.8
2,618,190	-				+1.4
2,618,291	-				-1.6
2,618,585	+		Rru_A2257	0.34	-0.1
2,618,585	+		Rru_A2257	0.34	-0.1
2,618,585	+		Rru_A2257	0.34	-0.1
2,618,585	+		Rru_A2257	0.34	-0.1
2,618,586	-		Rru_A2257	0.34	-0.1
2,618,586	-		Rru_A2257	0.34	-0.1
2,618,768	+		Rru_A2257	0.54	-0.1
2,618,769	-		Rru_A2257	0.54	-1.1
2,618,783	+		Rru_A2257	0.56	-1.6
2,618,847	-		Rru_A2257	0.63	-0.1
2,618,847	-		Rru_A2257	0.63	-0.1
2,618,953	+		Rru_A2257	0.74	-1.1
2,618,953	+		Rru_A2257	0.74	-2.2
2,618,953	+		Rru_A2257	0.74	-2.1
2,618,953	+		Rru_A2257	0.74	-0.1
2,618,954	-		Rru_A2257	0.74	-0.1
2,618,954	-		Rru_A2257	0.74	-0.1
2,618,954	-		Rru_A2257	0.74	-1.1
2,618,954	-		Rru_A2257	0.74	-0.1
2,618,954	-		Rru_A2257	0.74	-0.1