Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2253

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,614,323	+				+1.0
2,614,323	+				+1.4
2,614,323	+				-1.6
2,614,324	-				+0.8
2,614,324	-				+0.9
2,614,324	-				+0.8
2,614,324	-				+1.4
2,614,324	-				-0.1
2,614,344	+				-0.1
2,614,344	+				+0.8
2,614,344	+				-0.1
2,614,345	-				-0.1
2,614,345	-				+0.7
2,614,368	+				+0.2
2,614,368	+				+0.3
2,614,369	-				-1.1
2,614,380	+				-0.1
2,614,380	+				+1.4
2,614,434	+				+0.7
2,614,435	-				+0.7
2,614,435	-				+0.9
2,614,495	-				+1.7
2,614,654	+		Rru_A2252	0.22	+1.2
2,614,654	+		Rru_A2252	0.22	+0.5
2,614,655	-		Rru_A2252	0.22	-0.1
2,614,655	-		Rru_A2252	0.22	+0.9
2,614,655	-		Rru_A2252	0.22	+0.8
2,614,705	+		Rru_A2252	0.30	+3.3
2,614,705	+		Rru_A2252	0.30	+1.9
2,614,705	+		Rru_A2252	0.30	-0.4
2,614,705	+		Rru_A2252	0.30	+2.2
2,614,705	+		Rru_A2252	0.30	+1.3
2,614,705	+		Rru_A2252	0.30	+1.0
2,614,705	+		Rru_A2252	0.30	-0.1
2,614,705	+		Rru_A2252	0.30	+0.7
2,614,705	+		Rru_A2252	0.30	-0.1
2,614,705	+		Rru_A2252	0.30	+1.4
2,614,706	-		Rru_A2252	0.30	-0.1
2,614,706	-		Rru_A2252	0.30	+0.9
2,614,706	-		Rru_A2252	0.30	+0.9
2,614,708	+		Rru_A2252	0.30	-0.1
2,614,709	-		Rru_A2252	0.30	-0.1
2,614,783	+		Rru_A2252	0.41	-1.1
2,614,783	+		Rru_A2252	0.41	-0.1
2,614,783	+		Rru_A2252	0.41	-0.1
2,614,825	+		Rru_A2252	0.47	+1.3
2,614,825	+		Rru_A2252	0.47	-0.1
2,614,826	-		Rru_A2252	0.47	-0.1
2,614,918	+		Rru_A2252	0.60	+1.3
2,614,918	+		Rru_A2252	0.60	-0.1
2,614,919	-		Rru_A2252	0.60	+0.8
2,614,919	-		Rru_A2252	0.60	-0.1
2,615,074	+		Rru_A2252	0.82	-0.1
2,615,074	+		Rru_A2252	0.82	-1.6
2,615,075	-		Rru_A2252	0.83	+1.4
2,615,075	-		Rru_A2252	0.83	+1.0
2,615,075	-		Rru_A2252	0.83	+0.9
2,615,075	-		Rru_A2252	0.83	+1.2
2,615,075	-		Rru_A2252	0.83	+0.8
2,615,107	+		Rru_A2252	0.87	+1.9
2,615,107	+		Rru_A2252	0.87	+0.7
2,615,108	-		Rru_A2252	0.87	+0.9
2,615,371	+		Rru_A2253	0.23	-0.1
2,615,429	-		Rru_A2253	0.31	+1.1
2,615,429	-		Rru_A2253	0.31	+0.2
2,615,540	-		Rru_A2253	0.46	-0.1
2,615,608	+		Rru_A2253	0.55	-0.1
2,615,609	-		Rru_A2253	0.56	+1.4
2,615,745	+		Rru_A2253	0.74	-0.1
2,615,770	+		Rru_A2253	0.78	+3.9
2,615,771	-		Rru_A2253	0.78	+0.9
2,615,771	-		Rru_A2253	0.78	+1.7
2,615,771	-		Rru_A2253	0.78	+1.5
2,615,771	-		Rru_A2253	0.78	+2.6
2,615,779	+		Rru_A2253	0.79	+0.3
2,615,779	+		Rru_A2253	0.79	-0.1
2,615,782	+		Rru_A2253	0.80	-0.1
2,615,782	+		Rru_A2253	0.80	+0.9
2,615,782	+		Rru_A2253	0.80	-0.1
2,615,782	+		Rru_A2253	0.80	-0.1
2,615,783	-		Rru_A2253	0.80	-0.1
2,615,821	+		Rru_A2253	0.85	+1.3
2,615,821	+		Rru_A2253	0.85	-0.1
2,615,821	+		Rru_A2253	0.85	+1.8
2,615,821	+		Rru_A2253	0.85	-0.1
2,615,822	-		Rru_A2253	0.85	+0.5
2,615,822	-		Rru_A2253	0.85	+4.1
2,615,822	-		Rru_A2253	0.85	+1.6
2,615,836	+		Rru_A2253	0.87	+1.5
2,615,837	-		Rru_A2253	0.87	+1.7
2,615,995	+				+1.1
2,615,996	-		Rru_A2254	0.10	+0.5
2,615,996	-		Rru_A2254	0.10	-0.1
2,615,996	-		Rru_A2254	0.10	+0.4
2,616,022	+		Rru_A2254	0.15	-1.1
2,616,022	+		Rru_A2254	0.15	-0.1
2,616,023	-		Rru_A2254	0.15	+0.7
2,616,111	-		Rru_A2254	0.31	+0.1
2,616,242	+		Rru_A2254	0.55	-0.1
2,616,242	+		Rru_A2254	0.55	+1.4
2,616,243	-		Rru_A2254	0.55	+1.2
2,616,243	-		Rru_A2254	0.55	+2.3
2,616,243	-		Rru_A2254	0.55	+0.5
2,616,635	-				-0.1
2,616,635	-				+1.5
2,616,724	+		Rru_A2255	0.14	+0.9
2,616,725	-		Rru_A2255	0.14	-0.1
2,616,725	-		Rru_A2255	0.14	+0.4
2,616,725	-		Rru_A2255	0.14	+0.8