Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2197

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,550,535	-		Rru_A2195	0.85	+3.3
2,550,714	+				+1.4
2,550,714	+				+0.7
2,550,715	-				+1.5
2,550,715	-				-1.0
2,550,716	+				+0.5
2,550,717	-				-0.0
2,550,717	-				-0.0
2,550,717	-				+1.4
2,550,717	-				+1.1
2,550,717	-				-0.0
2,550,717	-				+1.3
2,550,717	-				+1.0
2,550,717	-				+2.0
2,550,717	-				+1.3
2,550,717	-				-0.0
2,550,775	-				-0.2
2,550,981	+				+0.2
2,550,981	+				-0.0
2,550,981	+				-0.0
2,550,981	+				-0.0
2,550,982	-				+0.8
2,550,982	-				+1.2
2,550,982	-				+0.5
2,551,012	+				-0.0
2,551,013	-				-0.0
2,551,152	-				+1.2
2,551,167	+				+0.9
2,551,167	+				-0.0
2,551,168	-				+4.0
2,551,168	-				+2.0
2,551,168	-				-0.0
2,551,210	+				-0.0
2,551,211	-				+1.0
2,551,304	+				+1.5
2,551,304	+				-0.0
2,551,305	-				-1.0
2,551,305	-				-0.2
2,551,305	-				+2.5
2,551,305	-				+1.7
2,551,306	+				+1.3
2,551,306	+				-0.0
2,551,306	+				+1.4
2,551,306	+				-0.0
2,551,307	-				+1.5
2,551,307	-				+0.8
2,551,464	-				+1.1
2,551,464	-				+1.6
2,551,614	+		Rru_A2197	0.21	+1.1
2,551,615	-		Rru_A2197	0.21	+1.5
2,551,615	-		Rru_A2197	0.21	-0.0
2,551,615	-		Rru_A2197	0.21	+1.5
2,551,615	-		Rru_A2197	0.21	+1.3
2,552,200	+				+0.5
2,552,222	-				+1.5
2,552,232	+				-0.0
2,552,233	-				+0.8
2,552,233	-				+0.2
2,552,285	-				+0.4
2,552,323	+				+0.3
2,552,323	+				-0.0
2,552,323	+				+1.5
2,552,323	+				+0.7
2,552,324	-				+1.2
2,552,324	-				+0.7
2,552,324	-				+1.3
2,552,324	-				-0.0
2,552,324	-				+1.5
2,552,324	-				-0.0
2,552,324	-				+2.7
2,552,326	+				-0.0
2,552,326	+				-1.6
2,552,327	-				-0.0
2,552,539	+		Rru_A2198	0.52	-0.0
2,552,539	+		Rru_A2198	0.52	+0.5
2,552,539	+		Rru_A2198	0.52	+0.9
2,552,540	-		Rru_A2198	0.52	-0.0
2,552,699	+		Rru_A2198	0.85	+1.0
2,552,820	-				+1.4
2,552,906	-				-0.0