Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2174

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,524,036	+		Rru_A2173	0.38	+1.1
2,524,036	+		Rru_A2173	0.38	-0.0
2,524,037	-		Rru_A2173	0.38	+0.2
2,524,037	-		Rru_A2173	0.38	+2.1
2,524,144	+		Rru_A2173	0.46	+1.1
2,524,144	+		Rru_A2173	0.46	+1.3
2,524,309	+		Rru_A2173	0.58	+2.3
2,524,310	-		Rru_A2173	0.58	+1.1
2,524,900	+				+1.0
2,524,961	+				+1.3
2,524,961	+				+0.8
2,524,961	+				-0.0
2,524,961	+				+1.3
2,524,961	+				+0.6
2,524,962	-				+2.5
2,524,962	-				-1.0
2,524,962	-				+0.1
2,524,962	-				+1.3
2,524,962	-				-0.0
2,524,962	-				-0.0
2,524,962	-				-0.0
2,524,963	+				-0.0
2,524,963	+				+0.9
2,524,963	+				+2.0
2,524,964	-				+1.3
2,524,964	-				+0.7
2,524,964	-				-0.0
2,524,972	-				+2.0
2,525,045	+				+2.8
2,525,045	+				-2.0
2,525,181	+		Rru_A2174	0.23	-0.0
2,525,182	-		Rru_A2174	0.23	+1.0
2,525,182	-		Rru_A2174	0.23	-0.0
2,525,183	+		Rru_A2174	0.23	-0.4
2,525,183	+		Rru_A2174	0.23	-0.0
2,525,183	+		Rru_A2174	0.23	-0.0
2,525,183	+		Rru_A2174	0.23	-0.0
2,525,183	+		Rru_A2174	0.23	-0.0
2,525,183	+		Rru_A2174	0.23	+2.1
2,525,184	-		Rru_A2174	0.23	-2.0
2,525,184	-		Rru_A2174	0.23	+1.4
2,525,208	+		Rru_A2174	0.25	+0.5
2,525,208	+		Rru_A2174	0.25	+1.4
2,525,209	-		Rru_A2174	0.25	-0.2
2,525,209	-		Rru_A2174	0.25	+0.7
2,525,209	-		Rru_A2174	0.25	-0.0
2,525,246	+		Rru_A2174	0.29	+1.3
2,525,246	+		Rru_A2174	0.29	+1.2
2,525,246	+		Rru_A2174	0.29	-1.6
2,525,246	+		Rru_A2174	0.29	-0.0
2,525,247	-		Rru_A2174	0.29	+0.8
2,525,247	-		Rru_A2174	0.29	-0.0
2,525,247	-		Rru_A2174	0.29	-0.0
2,525,247	-		Rru_A2174	0.29	+0.3
2,525,247	-		Rru_A2174	0.29	+1.5
2,525,272	-		Rru_A2174	0.32	-0.6
2,525,272	-		Rru_A2174	0.32	+0.1
2,525,309	+		Rru_A2174	0.36	-0.0
2,525,309	+		Rru_A2174	0.36	-1.6
2,525,309	+		Rru_A2174	0.36	+0.6
2,525,309	+		Rru_A2174	0.36	-0.0
2,525,310	-		Rru_A2174	0.36	-0.0
2,525,310	-		Rru_A2174	0.36	+1.2
2,525,310	-		Rru_A2174	0.36	+2.3
2,525,310	-		Rru_A2174	0.36	+1.0
2,525,310	-		Rru_A2174	0.36	+1.0
2,525,627	+		Rru_A2174	0.68	+0.4
2,525,627	+		Rru_A2174	0.68	+1.1
2,525,628	-		Rru_A2174	0.68	+1.3
2,525,800	+		Rru_A2174	0.86	-0.0
2,525,801	-		Rru_A2174	0.86	+0.6
2,525,891	+				-0.0
2,525,891	+				+0.8
2,525,892	-				-0.0
2,526,014	-				+0.8
2,526,014	-				-1.0
2,526,209	+		Rru_A2175	0.26	+0.7
2,526,210	-		Rru_A2175	0.26	-0.3
2,526,210	-		Rru_A2175	0.26	-0.0
2,526,211	+		Rru_A2175	0.26	+1.2
2,526,211	+		Rru_A2175	0.26	+3.1
2,526,211	+		Rru_A2175	0.26	+1.6
2,526,211	+		Rru_A2175	0.26	+0.3
2,526,211	+		Rru_A2175	0.26	-0.0
2,526,212	-		Rru_A2175	0.27	+1.5
2,526,274	+		Rru_A2175	0.33	-0.0
2,526,274	+		Rru_A2175	0.33	+1.0
2,526,274	+		Rru_A2175	0.33	+2.2
2,526,274	+		Rru_A2175	0.33	-0.3
2,526,275	-		Rru_A2175	0.33	+2.0
2,526,275	-		Rru_A2175	0.33	-0.0
2,526,275	-		Rru_A2175	0.33	+0.8
2,526,275	-		Rru_A2175	0.33	+1.0
2,526,275	-		Rru_A2175	0.33	+0.8
2,526,275	-		Rru_A2175	0.33	+0.4
2,526,599	+		Rru_A2175	0.64	+1.2