Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2120

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,460,934	+		Rru_A2119	0.65	-0.1
2,460,934	+		Rru_A2119	0.65	+1.7
2,460,935	-		Rru_A2119	0.65	+2.5
2,460,935	-		Rru_A2119	0.65	+0.6
2,460,935	-		Rru_A2119	0.65	+1.7
2,460,936	+		Rru_A2119	0.65	+1.5
2,460,936	+		Rru_A2119	0.65	+1.8
2,460,936	+		Rru_A2119	0.65	-0.4
2,460,936	+		Rru_A2119	0.65	+1.1
2,460,936	+		Rru_A2119	0.65	+1.4
2,460,937	-		Rru_A2119	0.65	+0.5
2,460,937	-		Rru_A2119	0.65	+1.5
2,460,937	-		Rru_A2119	0.65	-0.1
2,461,272	+		Rru_A2119	0.81	+1.2
2,461,335	+		Rru_A2119	0.84	+1.7
2,461,335	+		Rru_A2119	0.84	+0.9
2,461,336	-		Rru_A2119	0.84	+0.4
2,461,336	-		Rru_A2119	0.84	-0.1
2,461,336	-		Rru_A2119	0.84	+1.1
2,461,338	+		Rru_A2119	0.84	+1.2
2,461,338	+		Rru_A2119	0.84	-0.1
2,461,338	+		Rru_A2119	0.84	+0.7
2,461,339	-		Rru_A2119	0.84	-0.1
2,461,339	-		Rru_A2119	0.84	-0.1
2,461,339	-		Rru_A2119	0.84	-0.1
2,461,341	+		Rru_A2119	0.84	+1.1
2,461,342	-		Rru_A2119	0.84	+0.9
2,461,342	-		Rru_A2119	0.84	+0.8
2,461,543	+				+1.0
2,461,543	+				+1.2
2,461,543	+				+2.8
2,461,545	+				-1.1
2,461,545	+				+0.9
2,461,545	+				+0.9
2,461,545	+				+0.7
2,461,545	+				-0.1
2,461,545	+				-0.6
2,461,546	-				-0.1
2,461,546	-				+1.4
2,461,546	-				+0.1
2,461,546	-				+1.3
2,461,546	-				+1.2
2,461,546	-				+1.9
2,461,546	-				-0.1
2,461,719	+				-0.1
2,461,772	+				+0.5
2,461,772	+				+1.2
2,461,796	-				-0.1
2,461,849	+				-1.1
2,462,122	+		Rru_A2120	0.25	-0.1
2,462,122	+		Rru_A2120	0.25	+1.3
2,462,123	-		Rru_A2120	0.25	-0.1
2,462,123	-		Rru_A2120	0.25	-0.1
2,462,359	+		Rru_A2120	0.48	+0.1
2,462,360	-		Rru_A2120	0.48	+0.1
2,462,481	-		Rru_A2120	0.59	-0.1
2,462,494	+		Rru_A2120	0.60	-1.1
2,462,494	+		Rru_A2120	0.60	-0.1
2,462,645	-		Rru_A2120	0.75	-1.6
2,462,645	-		Rru_A2120	0.75	+0.5
2,462,656	-		Rru_A2120	0.76	+0.8
2,462,758	+		Rru_A2120	0.85	+1.4
2,462,974	+				+1.2
2,462,975	-				-0.1
2,462,975	-				+1.3
2,462,986	+				-0.1
2,462,986	+				-0.1
2,463,169	+		Rru_A2121	0.17	-0.1
2,463,169	+		Rru_A2121	0.17	-0.1
2,463,356	+		Rru_A2121	0.33	+0.9
2,463,356	+		Rru_A2121	0.33	-0.1
2,463,357	-		Rru_A2121	0.33	+1.9
2,463,357	-		Rru_A2121	0.33	+1.4
2,463,357	-		Rru_A2121	0.33	+1.5
2,463,357	-		Rru_A2121	0.33	+2.4
2,463,442	+		Rru_A2121	0.40	-0.4
2,463,442	+		Rru_A2121	0.40	-0.1
2,463,559	+		Rru_A2121	0.50	+0.8
2,463,734	-		Rru_A2121	0.64	+0.2
2,463,822	+		Rru_A2121	0.72	+1.2
2,463,823	-		Rru_A2121	0.72	-0.1
2,463,823	-		Rru_A2121	0.72	+0.3
2,463,890	+		Rru_A2121	0.78	+1.5
2,463,890	+		Rru_A2121	0.78	-0.1
2,463,890	+		Rru_A2121	0.78	-0.6
2,463,890	+		Rru_A2121	0.78	-0.1
2,463,890	+		Rru_A2121	0.78	-0.1