Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2119

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,458,622	+				-0.1
2,458,624	+				+0.9
2,458,624	+				-0.1
2,458,638	+				-0.1
2,458,638	+				+1.4
2,458,770	-		Rru_A2118	0.18	+1.3
2,458,774	-		Rru_A2118	0.18	+0.6
2,458,774	-		Rru_A2118	0.18	-0.1
2,458,986	+		Rru_A2118	0.44	+0.4
2,458,986	+		Rru_A2118	0.44	-0.1
2,458,986	+		Rru_A2118	0.44	-0.1
2,458,986	+		Rru_A2118	0.44	+1.8
2,458,987	-		Rru_A2118	0.44	+1.8
2,458,987	-		Rru_A2118	0.44	+3.0
2,458,987	-		Rru_A2118	0.44	+0.2
2,458,987	-		Rru_A2118	0.44	-1.1
2,458,989	+		Rru_A2118	0.44	-0.1
2,459,083	-		Rru_A2118	0.56	+0.9
2,459,268	-		Rru_A2118	0.78	-0.1
2,459,268	-		Rru_A2118	0.78	+1.2
2,459,268	-		Rru_A2118	0.78	+2.6
2,459,538	+				+1.0
2,459,551	+				-0.1
2,459,555	+				-0.1
2,459,556	-				-0.1
2,459,564	+				+1.9
2,459,569	+				-0.1
2,459,598	+				+1.1
2,459,619	+				-0.1
2,459,695	+				+0.8
2,459,695	+				+1.4
2,459,696	-				-0.1
2,459,791	+				-0.1
2,459,792	-				-0.1
2,459,792	-				-0.1
2,459,794	+				+1.2
2,459,794	+				+1.2
2,459,816	+		Rru_A2119	0.11	+1.3
2,459,816	+		Rru_A2119	0.11	-0.1
2,459,817	-		Rru_A2119	0.11	-0.1
2,460,216	-		Rru_A2119	0.30	+1.3
2,460,216	-		Rru_A2119	0.30	-0.1
2,460,327	+		Rru_A2119	0.35	+1.4
2,460,328	-		Rru_A2119	0.35	+1.3
2,460,328	-		Rru_A2119	0.35	+0.8
2,460,331	+		Rru_A2119	0.35	+0.9
2,460,331	+		Rru_A2119	0.35	-0.1
2,460,331	+		Rru_A2119	0.35	-0.1
2,460,331	+		Rru_A2119	0.35	-0.1
2,460,331	+		Rru_A2119	0.35	+1.1
2,460,331	+		Rru_A2119	0.35	+1.3
2,460,347	-		Rru_A2119	0.36	+3.9
2,460,348	+		Rru_A2119	0.36	-0.1
2,460,348	+		Rru_A2119	0.36	+1.4
2,460,348	+		Rru_A2119	0.36	+1.2
2,460,349	-		Rru_A2119	0.36	+1.4
2,460,349	-		Rru_A2119	0.36	+1.1
2,460,349	-		Rru_A2119	0.36	+0.5
2,460,349	-		Rru_A2119	0.36	+1.4
2,460,349	-		Rru_A2119	0.36	+1.5
2,460,349	-		Rru_A2119	0.36	-0.1
2,460,349	-		Rru_A2119	0.36	+0.9
2,460,352	+		Rru_A2119	0.36	+0.9
2,460,352	+		Rru_A2119	0.36	-0.1
2,460,352	+		Rru_A2119	0.36	+3.1
2,460,353	-		Rru_A2119	0.37	+1.0
2,460,353	-		Rru_A2119	0.37	-2.1
2,460,353	-		Rru_A2119	0.37	+1.4
2,460,647	-		Rru_A2119	0.51	+2.2
2,460,676	-		Rru_A2119	0.52	+1.9
2,460,778	-		Rru_A2119	0.57	-0.1
2,460,792	+		Rru_A2119	0.58	+2.6
2,460,793	-		Rru_A2119	0.58	+0.6
2,460,793	-		Rru_A2119	0.58	+1.7
2,460,813	+		Rru_A2119	0.59	+1.4
2,460,813	+		Rru_A2119	0.59	+0.2
2,460,813	+		Rru_A2119	0.59	-0.1
2,460,814	-		Rru_A2119	0.59	+1.4
2,460,934	+		Rru_A2119	0.65	-0.1
2,460,934	+		Rru_A2119	0.65	+1.7
2,460,935	-		Rru_A2119	0.65	+2.5
2,460,935	-		Rru_A2119	0.65	+0.6
2,460,935	-		Rru_A2119	0.65	+1.7
2,460,936	+		Rru_A2119	0.65	+1.5
2,460,936	+		Rru_A2119	0.65	+1.8
2,460,936	+		Rru_A2119	0.65	-0.4
2,460,936	+		Rru_A2119	0.65	+1.1
2,460,936	+		Rru_A2119	0.65	+1.4
2,460,937	-		Rru_A2119	0.65	+0.5
2,460,937	-		Rru_A2119	0.65	+1.5
2,460,937	-		Rru_A2119	0.65	-0.1
2,461,272	+		Rru_A2119	0.81	+1.2
2,461,335	+		Rru_A2119	0.84	+1.7
2,461,335	+		Rru_A2119	0.84	+0.9
2,461,336	-		Rru_A2119	0.84	+0.4
2,461,336	-		Rru_A2119	0.84	-0.1
2,461,336	-		Rru_A2119	0.84	+1.1
2,461,338	+		Rru_A2119	0.84	+1.2
2,461,338	+		Rru_A2119	0.84	-0.1
2,461,338	+		Rru_A2119	0.84	+0.7
2,461,339	-		Rru_A2119	0.84	-0.1
2,461,339	-		Rru_A2119	0.84	-0.1
2,461,339	-		Rru_A2119	0.84	-0.1
2,461,341	+		Rru_A2119	0.84	+1.1
2,461,342	-		Rru_A2119	0.84	+0.9
2,461,342	-		Rru_A2119	0.84	+0.8
2,461,543	+				+1.0
2,461,543	+				+1.2
2,461,543	+				+2.8
2,461,545	+				-1.1
2,461,545	+				+0.9
2,461,545	+				+0.9
2,461,545	+				+0.7
2,461,545	+				-0.1
2,461,545	+				-0.6
2,461,546	-				-0.1
2,461,546	-				+1.4
2,461,546	-				+0.1
2,461,546	-				+1.3
2,461,546	-				+1.2
2,461,546	-				+1.9
2,461,546	-				-0.1
2,461,719	+				-0.1
2,461,772	+				+0.5
2,461,772	+				+1.2
2,461,796	-				-0.1
2,461,849	+				-1.1
2,462,122	+		Rru_A2120	0.25	-0.1
2,462,122	+		Rru_A2120	0.25	+1.3
2,462,123	-		Rru_A2120	0.25	-0.1
2,462,123	-		Rru_A2120	0.25	-0.1
2,462,359	+		Rru_A2120	0.48	+0.1
2,462,360	-		Rru_A2120	0.48	+0.1
2,462,481	-		Rru_A2120	0.59	-0.1
2,462,494	+		Rru_A2120	0.60	-1.1
2,462,494	+		Rru_A2120	0.60	-0.1
2,462,645	-		Rru_A2120	0.75	-1.6
2,462,645	-		Rru_A2120	0.75	+0.5
2,462,656	-		Rru_A2120	0.76	+0.8