Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2110

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,448,278	+		Rru_A2109	0.77	+1.9
2,448,279	-		Rru_A2109	0.77	-1.6
2,448,279	-		Rru_A2109	0.77	-0.1
2,448,404	+		Rru_A2109	0.82	-0.1
2,448,404	+		Rru_A2109	0.82	-0.1
2,448,405	-		Rru_A2109	0.83	-0.1
2,448,405	-		Rru_A2109	0.83	-1.6
2,448,405	-		Rru_A2109	0.83	-1.1
2,448,429	+		Rru_A2109	0.84	+1.8
2,448,430	-		Rru_A2109	0.84	+0.9
2,448,449	+		Rru_A2109	0.84	+1.9
2,448,492	+		Rru_A2109	0.86	+1.8
2,448,743	+				-0.1
2,448,744	-				-1.1
2,448,744	-				+0.9
2,448,744	-				+0.8
2,448,802	-				-0.1
2,448,828	+				-0.1
2,448,829	-				-0.6
2,448,962	+				-0.1
2,448,963	-				-0.1
2,448,963	-				+1.9
2,449,053	+				-0.1
2,449,053	+				-0.1
2,449,054	-				+0.2
2,449,140	+		Rru_A2110	0.21	+0.4
2,449,140	+		Rru_A2110	0.21	-0.1
2,449,140	+		Rru_A2110	0.21	+0.6
2,449,140	+		Rru_A2110	0.21	-1.6
2,449,141	-		Rru_A2110	0.21	-0.1
2,449,141	-		Rru_A2110	0.21	-0.1
2,449,144	+		Rru_A2110	0.22	-0.1
2,449,145	-		Rru_A2110	0.22	-0.1
2,449,145	-		Rru_A2110	0.22	-0.1
2,449,145	-		Rru_A2110	0.22	-0.1
2,449,147	-		Rru_A2110	0.23	-1.1
2,449,147	-		Rru_A2110	0.23	-0.3
2,449,193	-		Rru_A2110	0.34	-1.1
2,449,264	-		Rru_A2110	0.51	-0.7
2,449,264	-		Rru_A2110	0.51	-0.1
2,449,264	-		Rru_A2110	0.51	+0.9
2,449,288	+		Rru_A2110	0.57	+0.4
2,449,290	+		Rru_A2110	0.57	+2.3
2,449,290	+		Rru_A2110	0.57	-0.1
2,449,466	-				-0.1
2,449,490	+				-0.1
2,449,490	+				-0.1
2,449,490	+				+1.7
2,449,491	-				+0.8
2,449,491	-				-0.1
2,449,491	-				-0.1
2,450,224	+		Rru_A2111	0.60	+1.0
2,450,224	+		Rru_A2111	0.60	+0.7
2,450,225	-		Rru_A2111	0.60	+1.2
2,450,225	-		Rru_A2111	0.60	+1.4