Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2084

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,411,332	-				+0.9
2,411,338	+				+0.4
2,411,338	+				+1.1
2,411,338	+				-1.1
2,411,338	+				-0.1
2,411,419	+		Rru_A2083	0.18	+1.9
2,411,419	+		Rru_A2083	0.18	+1.9
2,411,419	+		Rru_A2083	0.18	+0.9
2,411,419	+		Rru_A2083	0.18	+0.9
2,411,420	-		Rru_A2083	0.18	+0.4
2,411,420	-		Rru_A2083	0.18	-0.1
2,411,420	-		Rru_A2083	0.18	-0.1
2,411,420	-		Rru_A2083	0.18	-0.1
2,411,567	+		Rru_A2083	0.49	-0.1
2,411,675	+		Rru_A2083	0.72	-0.1
2,411,675	+		Rru_A2083	0.72	+0.2
2,411,676	-		Rru_A2083	0.72	+0.3
2,411,787	+				+0.4
2,411,842	+				-0.1
2,411,842	+				-1.1
2,411,904	+				-0.1
2,411,904	+				+0.7
2,411,905	-				+0.6
2,411,905	-				+2.9
2,411,905	-				+2.0
2,411,905	-				-0.1
2,411,918	+				-0.1
2,412,160	+				+1.4
2,412,286	+		Rru_A2084	0.11	+0.3
2,412,286	+		Rru_A2084	0.11	+1.4
2,412,287	-		Rru_A2084	0.11	-0.1
2,412,332	+		Rru_A2084	0.15	+1.0
2,412,332	+		Rru_A2084	0.15	-0.4
2,412,332	+		Rru_A2084	0.15	+2.0
2,412,332	+		Rru_A2084	0.15	+0.1
2,412,332	+		Rru_A2084	0.15	-0.1
2,412,333	-		Rru_A2084	0.15	-0.1
2,412,333	-		Rru_A2084	0.15	+1.4
2,412,333	-		Rru_A2084	0.15	-0.1
2,412,333	-		Rru_A2084	0.15	-0.1
2,412,333	-		Rru_A2084	0.15	-0.1
2,412,397	+		Rru_A2084	0.20	+1.6
2,412,398	-		Rru_A2084	0.20	-1.4
2,412,398	-		Rru_A2084	0.20	+2.3
2,412,398	-		Rru_A2084	0.20	-0.1
2,412,496	+		Rru_A2084	0.28	+0.4
2,412,565	+		Rru_A2084	0.34	+1.0
2,412,565	+		Rru_A2084	0.34	+1.5
2,412,565	+		Rru_A2084	0.34	-0.1
2,412,565	+		Rru_A2084	0.34	+1.0
2,412,565	+		Rru_A2084	0.34	+1.5
2,412,565	+		Rru_A2084	0.34	+1.2
2,412,565	+		Rru_A2084	0.34	+1.0
2,412,565	+		Rru_A2084	0.34	+0.8
2,412,565	+		Rru_A2084	0.34	+0.9
2,412,565	+		Rru_A2084	0.34	+1.3
2,412,565	+		Rru_A2084	0.34	-0.2
2,412,565	+		Rru_A2084	0.34	+1.0
2,412,565	+		Rru_A2084	0.34	+1.2
2,412,566	-		Rru_A2084	0.34	+1.0
2,412,566	-		Rru_A2084	0.34	+1.1
2,412,566	-		Rru_A2084	0.34	-0.1
2,412,566	-		Rru_A2084	0.34	-0.1
2,412,566	-		Rru_A2084	0.34	+1.6
2,412,566	-		Rru_A2084	0.34	-0.1
2,412,566	-		Rru_A2084	0.34	+0.9
2,412,566	-		Rru_A2084	0.34	-1.1
2,412,566	-		Rru_A2084	0.34	+0.6
2,412,566	-		Rru_A2084	0.34	-0.1
2,412,566	-		Rru_A2084	0.34	-0.1
2,412,616	+		Rru_A2084	0.39	-0.1
2,412,617	-		Rru_A2084	0.39	+1.0
2,412,743	-		Rru_A2084	0.49	+1.5
2,412,761	+		Rru_A2084	0.51	+0.8
2,412,761	+		Rru_A2084	0.51	+1.1
2,412,762	-		Rru_A2084	0.51	+2.1
2,412,762	-		Rru_A2084	0.51	-0.1
2,412,763	+		Rru_A2084	0.51	+0.8
2,412,763	+		Rru_A2084	0.51	+1.0
2,412,763	+		Rru_A2084	0.51	+0.5
2,412,763	+		Rru_A2084	0.51	-0.1
2,412,763	+		Rru_A2084	0.51	-0.1
2,412,763	+		Rru_A2084	0.51	+1.5
2,412,763	+		Rru_A2084	0.51	+1.3
2,412,763	+		Rru_A2084	0.51	-0.1
2,412,763	+		Rru_A2084	0.51	-0.1
2,412,763	+		Rru_A2084	0.51	+1.5
2,412,764	-		Rru_A2084	0.51	+1.3
2,412,764	-		Rru_A2084	0.51	+0.9
2,412,764	-		Rru_A2084	0.51	+1.7
2,412,973	+		Rru_A2084	0.69	-0.1
2,412,973	+		Rru_A2084	0.69	-0.1
2,412,973	+		Rru_A2084	0.69	+2.1
2,412,973	+		Rru_A2084	0.69	+1.6
2,412,974	-		Rru_A2084	0.69	-0.1
2,412,974	-		Rru_A2084	0.69	+0.3
2,412,982	+		Rru_A2084	0.69	+0.8
2,412,982	+		Rru_A2084	0.69	-0.1
2,412,983	-		Rru_A2084	0.70	+0.4
2,413,105	+		Rru_A2084	0.80	+0.9
2,413,105	+		Rru_A2084	0.80	-0.1
2,413,105	+		Rru_A2084	0.80	+0.5
2,413,105	+		Rru_A2084	0.80	-0.1
2,413,105	+		Rru_A2084	0.80	-0.1
2,413,106	-		Rru_A2084	0.80	+0.2
2,413,370	+				+0.5
2,413,370	+				-0.1
2,413,370	+				-2.1
2,413,371	-				-0.1
2,413,371	-				+1.1
2,413,514	+				+0.6
2,413,588	+				-0.1
2,413,852	+		Rru_A2085	0.44	-0.1
2,413,852	+		Rru_A2085	0.44	-0.1
2,413,852	+		Rru_A2085	0.44	-0.1
2,413,981	+		Rru_A2085	0.82	-1.1
2,414,010	+				-0.1
2,414,010	+				-0.1
2,414,038	+				+0.3