Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2075

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,400,866	+		Rru_A2074	0.20	-0.1
2,400,866	+		Rru_A2074	0.20	+2.4
2,400,867	-		Rru_A2074	0.20	-0.1
2,400,867	-		Rru_A2074	0.20	-0.1
2,400,867	-		Rru_A2074	0.20	+0.8
2,400,867	-		Rru_A2074	0.20	-0.1
2,400,867	-		Rru_A2074	0.20	+1.0
2,400,867	-		Rru_A2074	0.20	+0.9
2,400,881	+		Rru_A2074	0.21	-0.1
2,400,882	-		Rru_A2074	0.22	+1.5
2,400,882	-		Rru_A2074	0.22	-0.1
2,401,142	+		Rru_A2074	0.45	-0.1
2,401,142	+		Rru_A2074	0.45	+0.7
2,401,143	-		Rru_A2074	0.45	+2.5
2,401,344	+		Rru_A2074	0.64	+1.3
2,401,344	+		Rru_A2074	0.64	+1.1
2,401,344	+		Rru_A2074	0.64	-0.1
2,401,345	-		Rru_A2074	0.64	-0.1
2,401,345	-		Rru_A2074	0.64	+1.5
2,401,346	+		Rru_A2074	0.64	-1.6
2,401,346	+		Rru_A2074	0.64	+1.3
2,401,346	+		Rru_A2074	0.64	+1.2
2,401,346	+		Rru_A2074	0.64	-0.1
2,401,347	-		Rru_A2074	0.64	+1.9
2,401,361	+		Rru_A2074	0.65	+1.2
2,401,361	+		Rru_A2074	0.65	-0.1
2,401,420	-		Rru_A2074	0.71	+0.9
2,401,595	+		Rru_A2074	0.87	-0.1
2,401,595	+		Rru_A2074	0.87	+0.2
2,401,596	-		Rru_A2074	0.87	+0.5
2,401,687	-				+1.4
2,401,765	+				+2.5
2,401,765	+				-0.1
2,401,766	-				-0.1
2,401,766	-				+0.9
2,401,773	+				-0.1
2,401,774	-				+2.3
2,401,793	+				+1.6
2,401,815	+				+1.0
2,401,845	+				-0.1
2,401,947	+				+2.9
2,401,948	-				+0.2
2,401,948	-				-0.1
2,401,948	-				+0.8
2,401,948	-				-0.1
2,401,948	-				+1.1
2,401,948	-				+0.7
2,402,025	+		Rru_A2075	0.11	-0.1
2,402,025	+		Rru_A2075	0.11	-0.1
2,402,025	+		Rru_A2075	0.11	+0.1
2,402,026	-		Rru_A2075	0.11	+0.7
2,402,026	-		Rru_A2075	0.11	-0.1
2,402,026	-		Rru_A2075	0.11	+2.1
2,402,026	-		Rru_A2075	0.11	+0.4
2,402,266	+		Rru_A2075	0.24	+1.8
2,402,267	-		Rru_A2075	0.24	-0.1
2,402,267	-		Rru_A2075	0.24	-0.1
2,402,469	+		Rru_A2075	0.35	-0.1
2,402,469	+		Rru_A2075	0.35	+0.6
2,402,469	+		Rru_A2075	0.35	-1.1
2,402,470	-		Rru_A2075	0.35	+0.3
2,402,470	-		Rru_A2075	0.35	-0.1
2,402,470	-		Rru_A2075	0.35	+1.5
2,402,470	-		Rru_A2075	0.35	+2.9
2,402,470	-		Rru_A2075	0.35	+0.6
2,402,484	+		Rru_A2075	0.36	+1.0
2,402,484	+		Rru_A2075	0.36	+1.6
2,402,485	-		Rru_A2075	0.36	+0.9
2,402,485	-		Rru_A2075	0.36	-0.1
2,402,541	+		Rru_A2075	0.39	-0.1
2,402,547	+		Rru_A2075	0.39	+0.6
2,402,712	+		Rru_A2075	0.48	-0.1
2,402,712	+		Rru_A2075	0.48	+0.9
2,402,712	+		Rru_A2075	0.48	-0.1
2,402,712	+		Rru_A2075	0.48	+0.8
2,402,712	+		Rru_A2075	0.48	+1.4
2,402,713	-		Rru_A2075	0.48	+1.0
2,402,713	-		Rru_A2075	0.48	-0.1
2,402,949	+		Rru_A2075	0.61	-1.1
2,402,949	+		Rru_A2075	0.61	-0.1
2,402,950	-		Rru_A2075	0.61	-0.1
2,402,950	-		Rru_A2075	0.61	-0.1
2,403,080	+		Rru_A2075	0.68	+1.3
2,403,115	-		Rru_A2075	0.70	-1.1
2,403,115	-		Rru_A2075	0.70	+1.3
2,403,115	-		Rru_A2075	0.70	-0.1
2,403,115	-		Rru_A2075	0.70	+0.8
2,403,336	+		Rru_A2075	0.82	+1.0
2,403,337	-		Rru_A2075	0.82	+1.1
2,403,381	+		Rru_A2075	0.85	-0.1
2,403,381	+		Rru_A2075	0.85	-0.1
2,403,381	+		Rru_A2075	0.85	-0.1
2,403,381	+		Rru_A2075	0.85	+1.5
2,403,382	-		Rru_A2075	0.85	-0.1
2,403,382	-		Rru_A2075	0.85	+0.9
2,403,382	-		Rru_A2075	0.85	-1.1
2,403,723	-				+1.7
2,403,946	+				-0.1
2,403,947	-				+1.1
2,403,974	+				+1.3
2,404,132	+		Rru_A2076	0.12	-0.1
2,404,152	+		Rru_A2076	0.13	+1.1
2,404,152	+		Rru_A2076	0.13	-0.1
2,404,152	+		Rru_A2076	0.13	-0.1
2,404,152	+		Rru_A2076	0.13	+1.4
2,404,152	+		Rru_A2076	0.13	+0.9
2,404,152	+		Rru_A2076	0.13	+0.5
2,404,153	-		Rru_A2076	0.13	+0.9
2,404,153	-		Rru_A2076	0.13	+0.2
2,404,153	-		Rru_A2076	0.13	-0.1
2,404,278	+		Rru_A2076	0.20	-0.1
2,404,278	+		Rru_A2076	0.20	+1.6
2,404,278	+		Rru_A2076	0.20	+1.4
2,404,278	+		Rru_A2076	0.20	+2.3
2,404,278	+		Rru_A2076	0.20	+1.0
2,404,278	+		Rru_A2076	0.20	+0.6
2,404,278	+		Rru_A2076	0.20	+1.1
2,404,278	+		Rru_A2076	0.20	-0.1
2,404,279	-		Rru_A2076	0.20	-0.1
2,404,299	+		Rru_A2076	0.22	+0.1
2,404,299	+		Rru_A2076	0.22	+1.1
2,404,299	+		Rru_A2076	0.22	+0.6
2,404,300	-		Rru_A2076	0.22	+1.2
2,404,401	+		Rru_A2076	0.28	-0.1