Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2012

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,325,530	+		Rru_A2011	0.48	-1.1
2,325,530	+		Rru_A2011	0.48	+1.0
2,325,531	-		Rru_A2011	0.48	-0.1
2,325,531	-		Rru_A2011	0.48	-0.1
2,325,542	-		Rru_A2011	0.49	+0.6
2,325,630	+		Rru_A2011	0.54	+0.9
2,325,632	+		Rru_A2011	0.54	+2.9
2,325,633	-		Rru_A2011	0.54	+1.4
2,325,633	-		Rru_A2011	0.54	+0.5
2,325,633	-		Rru_A2011	0.54	+3.0
2,326,059	+		Rru_A2011	0.79	+1.3
2,326,059	+		Rru_A2011	0.79	+0.9
2,326,060	-		Rru_A2011	0.80	-0.1
2,326,060	-		Rru_A2011	0.80	-0.1
2,326,072	-		Rru_A2011	0.80	-0.1
2,326,072	-		Rru_A2011	0.80	-0.1
2,326,072	-		Rru_A2011	0.80	+0.5
2,326,336	-				+0.1
2,326,507	+		Rru_A2012	0.13	-0.1
2,326,507	+		Rru_A2012	0.13	+1.3
2,326,507	+		Rru_A2012	0.13	-1.1
2,326,507	+		Rru_A2012	0.13	-0.1
2,326,507	+		Rru_A2012	0.13	+0.1
2,326,508	-		Rru_A2012	0.13	+0.9
2,326,508	-		Rru_A2012	0.13	+0.7
2,326,639	+		Rru_A2012	0.29	+0.9
2,326,773	-		Rru_A2012	0.45	+0.7
2,326,927	+		Rru_A2012	0.63	+1.8
2,326,928	-		Rru_A2012	0.63	-0.1
2,326,928	-		Rru_A2012	0.63	-0.1
2,326,931	-		Rru_A2012	0.64	-0.1
2,326,931	-		Rru_A2012	0.64	+0.2
2,327,212	+				+0.5
2,327,276	+				+0.9
2,327,276	+				+1.1
2,327,277	-				-0.1
2,327,277	-				+1.5
2,327,277	-				+0.8
2,327,277	-				+2.3
2,327,277	-				-1.1
2,327,277	-				+1.0
2,327,277	-				-0.1
2,327,277	-				+1.9
2,327,346	+		Rru_A2013	0.11	+0.5
2,327,375	+		Rru_A2013	0.14	+0.2
2,327,375	+		Rru_A2013	0.14	-0.1
2,327,600	+		Rru_A2013	0.37	-0.1
2,327,601	-		Rru_A2013	0.37	-0.1
2,327,601	-		Rru_A2013	0.37	+1.1
2,327,601	-		Rru_A2013	0.37	+2.1
2,327,646	+		Rru_A2013	0.42	-1.1
2,327,786	+		Rru_A2013	0.56	-0.1
2,327,787	-		Rru_A2013	0.56	-0.1
2,327,787	-		Rru_A2013	0.56	+1.5
2,327,817	+		Rru_A2013	0.59	+1.4
2,327,818	-		Rru_A2013	0.59	-0.1
2,327,829	+		Rru_A2013	0.60	+0.6
2,327,829	+		Rru_A2013	0.60	+2.3
2,327,830	-		Rru_A2013	0.61	-0.3
2,327,830	-		Rru_A2013	0.61	-0.1
2,327,830	-		Rru_A2013	0.61	+1.1
2,327,830	-		Rru_A2013	0.61	-0.1
2,327,957	+		Rru_A2013	0.73	-0.1
2,327,957	+		Rru_A2013	0.73	+1.3
2,327,958	-		Rru_A2013	0.74	+2.2
2,327,958	-		Rru_A2013	0.74	+2.3
2,327,958	-		Rru_A2013	0.74	-1.4
2,327,969	+		Rru_A2013	0.75	+0.7
2,328,003	-		Rru_A2013	0.78	+2.4
2,328,003	-		Rru_A2013	0.78	+1.1
2,328,003	-		Rru_A2013	0.78	-0.1
2,328,003	-		Rru_A2013	0.78	-0.1
2,328,041	+		Rru_A2013	0.82	+1.3
2,328,042	-		Rru_A2013	0.82	-0.1
2,328,042	-		Rru_A2013	0.82	-0.1
2,328,042	-		Rru_A2013	0.82	-0.1