Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1999

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,308,387	+		Rru_A1998	0.46	+1.8
2,308,387	+		Rru_A1998	0.46	-2.1
2,308,506	+		Rru_A1998	0.56	+0.5
2,308,542	+		Rru_A1998	0.59	+1.4
2,308,542	+		Rru_A1998	0.59	-0.1
2,308,542	+		Rru_A1998	0.59	+0.3
2,308,867	+		Rru_A1998	0.88	+0.9
2,308,867	+		Rru_A1998	0.88	-1.1
2,308,867	+		Rru_A1998	0.88	+2.1
2,308,867	+		Rru_A1998	0.88	+2.5
2,308,867	+		Rru_A1998	0.88	+1.4
2,308,867	+		Rru_A1998	0.88	+0.4
2,308,868	-		Rru_A1998	0.88	+1.8
2,308,868	-		Rru_A1998	0.88	-0.1
2,308,997	-				-0.1
2,309,003	+				+0.9
2,309,004	-				-0.1
2,309,100	-		Rru_A1999	0.10	+0.9
2,309,121	+		Rru_A1999	0.17	-0.1
2,309,184	+		Rru_A1999	0.37	+0.5
2,309,367	+				+1.0
2,309,368	-				-0.9
2,309,422	+				-0.6
2,309,721	+				-0.1
2,309,721	+				+1.5
2,309,721	+				+1.0
2,309,721	+				+1.3
2,309,722	-				+0.8
2,309,722	-				+1.5
2,309,723	+				+0.5
2,309,723	+				+0.7
2,309,723	+				-1.1
2,309,724	-				+1.8
2,309,761	+				+0.5
2,309,761	+				+1.1
2,309,762	-				-0.1
2,309,799	+				+0.7
2,309,801	+				+0.1
2,309,801	+				+0.9
2,310,011	+		Rru_A2000	0.17	-0.1
2,310,012	-		Rru_A2000	0.17	+1.8
2,310,013	+		Rru_A2000	0.17	-0.1
2,310,218	+		Rru_A2000	0.61	+0.4
2,310,291	+		Rru_A2000	0.76	+1.5
2,310,291	+		Rru_A2000	0.76	+0.9
2,310,292	-		Rru_A2000	0.76	-0.1
2,310,292	-		Rru_A2000	0.76	+3.3
2,310,292	-		Rru_A2000	0.76	-0.1