Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1982

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,292,923	+		Rru_A1981	0.20	+1.1
2,292,923	+		Rru_A1981	0.20	+1.3
2,292,923	+		Rru_A1981	0.20	+2.9
2,292,924	-		Rru_A1981	0.20	+1.9
2,292,924	-		Rru_A1981	0.20	+0.8
2,293,292	+		Rru_A1981	0.52	+1.4
2,293,293	-		Rru_A1981	0.53	+0.9
2,293,293	-		Rru_A1981	0.53	+2.1
2,293,293	-		Rru_A1981	0.53	+1.0
2,293,506	-		Rru_A1981	0.71	+2.1
2,293,506	-		Rru_A1981	0.71	+0.9
2,293,727	+				+1.2
2,293,727	+				-1.1
2,293,728	-				+1.1
2,293,830	+				+1.1
2,293,830	+				-0.4
2,293,831	-				-0.5
2,293,831	-				-0.1
2,293,887	+				+0.6
2,293,890	+				-0.6
2,293,891	-				-0.1
2,293,917	+				+0.6
2,293,917	+				-0.1
2,293,917	+				-0.1
2,293,918	-				+0.4
2,293,918	-				-0.1
2,294,271	+		Rru_A1982	0.76	-0.1
2,294,272	-		Rru_A1982	0.76	+0.2
2,294,272	-		Rru_A1982	0.76	+0.8
2,294,392	+				-0.1
2,294,397	+				+0.8
2,294,397	+				+0.5
2,294,397	+				-0.1
2,294,397	+				-0.1
2,294,398	-				-2.1
2,294,398	-				+2.0
2,294,472	+				+2.5
2,294,472	+				-0.1
2,294,473	-				+2.1
2,294,532	+		Rru_A1983	0.18	+0.6
2,294,532	+		Rru_A1983	0.18	+1.9
2,294,533	-		Rru_A1983	0.18	+2.6
2,294,533	-		Rru_A1983	0.18	+2.0
2,294,533	-		Rru_A1983	0.18	+2.4
2,294,667	+		Rru_A1983	0.83	+1.9
2,294,668	-		Rru_A1983	0.84	-0.6
2,294,668	-		Rru_A1983	0.84	+1.9
2,294,668	-		Rru_A1983	0.84	+2.8
2,294,668	-		Rru_A1983	0.84	+2.1
2,294,727	+				+0.5
2,294,727	+				+2.2
2,294,727	+				+1.3
2,294,728	-				-0.1
2,294,728	-				-0.1
2,294,728	-				-0.1
2,295,090	+		Rru_A1984	0.49	+1.2
2,295,090	+		Rru_A1984	0.49	+0.9
2,295,091	-		Rru_A1984	0.49	-0.1
2,295,091	-		Rru_A1984	0.49	+1.4
2,295,372	-		Rru_A1985	0.24	+0.9
2,295,372	-		Rru_A1985	0.24	+0.9