Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1969

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,275,435	-		Rru_A1967	0.74	+0.7
2,275,435	-		Rru_A1967	0.74	-0.1
2,275,435	-		Rru_A1967	0.74	-0.1
2,275,494	+		Rru_A1967	0.78	+0.4
2,275,870	-				-0.1
2,275,959	+		Rru_A1968	0.25	-0.1
2,275,959	+		Rru_A1968	0.25	+0.9
2,275,959	+		Rru_A1968	0.25	+2.3
2,275,959	+		Rru_A1968	0.25	-0.1
2,275,959	+		Rru_A1968	0.25	+0.9
2,275,960	-		Rru_A1968	0.25	-0.1
2,275,960	-		Rru_A1968	0.25	+1.0
2,275,976	+		Rru_A1968	0.29	+2.1
2,275,977	-		Rru_A1968	0.29	+1.4
2,275,977	-		Rru_A1968	0.29	+1.1
2,275,977	-		Rru_A1968	0.29	-0.1
2,276,675	+		Rru_A1969	0.27	+2.5
2,276,969	+		Rru_A1969	0.53	-0.1
2,276,970	-		Rru_A1969	0.54	+2.3
2,276,970	-		Rru_A1969	0.54	+2.8
2,277,023	+		Rru_A1969	0.58	+1.4
2,277,489	-				+1.1
2,277,564	+				-0.1
2,277,564	+				+1.8
2,277,564	+				-0.1
2,277,565	-				+0.7
2,277,565	-				-0.6
2,277,567	-				-0.1
2,277,882	+		Rru_A1970	0.23	+0.2
2,277,883	-		Rru_A1970	0.23	+2.9
2,277,883	-		Rru_A1970	0.23	+1.1
2,277,884	+		Rru_A1970	0.23	-0.1
2,277,884	+		Rru_A1970	0.23	-0.1
2,277,884	+		Rru_A1970	0.23	+1.5
2,277,885	-		Rru_A1970	0.23	+1.5
2,277,920	+		Rru_A1970	0.25	-0.1
2,277,921	-		Rru_A1970	0.25	-0.1
2,277,921	-		Rru_A1970	0.25	+0.4
2,277,930	+		Rru_A1970	0.26	+1.1
2,277,931	-		Rru_A1970	0.26	-1.1
2,278,067	+		Rru_A1970	0.34	-1.1
2,278,067	+		Rru_A1970	0.34	+1.6
2,278,067	+		Rru_A1970	0.34	-0.1
2,278,067	+		Rru_A1970	0.34	+2.5
2,278,067	+		Rru_A1970	0.34	-0.1
2,278,067	+		Rru_A1970	0.34	-0.1
2,278,067	+		Rru_A1970	0.34	+1.3
2,278,067	+		Rru_A1970	0.34	+1.1
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,068	-		Rru_A1970	0.34	+1.5
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,068	-		Rru_A1970	0.34	+1.3
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,068	-		Rru_A1970	0.34	+1.5
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,068	-		Rru_A1970	0.34	-1.4
2,278,068	-		Rru_A1970	0.34	+0.7
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,068	-		Rru_A1970	0.34	+0.9
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,068	-		Rru_A1970	0.34	+0.5
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,068	-		Rru_A1970	0.34	-0.1
2,278,181	+		Rru_A1970	0.40	+0.9
2,278,182	-		Rru_A1970	0.40	+0.7
2,278,182	-		Rru_A1970	0.40	+1.5
2,278,301	+		Rru_A1970	0.47	-0.1
2,278,302	-		Rru_A1970	0.47	+0.9
2,278,302	-		Rru_A1970	0.47	+1.4
2,278,364	+		Rru_A1970	0.51	-0.1