Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1955

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,263,479	+		Rru_A1954	0.22	+1.3
2,263,486	+		Rru_A1954	0.23	+1.9
2,263,486	+		Rru_A1954	0.23	+1.1
2,263,486	+		Rru_A1954	0.23	+1.0
2,263,486	+		Rru_A1954	0.23	+1.2
2,263,486	+		Rru_A1954	0.23	+1.5
2,263,486	+		Rru_A1954	0.23	-0.1
2,263,487	-		Rru_A1954	0.23	+2.4
2,263,487	-		Rru_A1954	0.23	+1.3
2,263,487	-		Rru_A1954	0.23	+1.3
2,263,487	-		Rru_A1954	0.23	+3.4
2,263,487	-		Rru_A1954	0.23	+1.7
2,263,487	-		Rru_A1954	0.23	+1.5
2,263,487	-		Rru_A1954	0.23	-0.1
2,263,584	+		Rru_A1954	0.34	+0.6
2,263,584	+		Rru_A1954	0.34	-0.1
2,263,637	+		Rru_A1954	0.40	+0.7
2,263,637	+		Rru_A1954	0.40	+1.0
2,263,638	-		Rru_A1954	0.40	-0.1
2,263,638	-		Rru_A1954	0.40	+0.5
2,263,638	-		Rru_A1954	0.40	-0.1
2,263,771	+		Rru_A1954	0.54	+0.3
2,263,771	+		Rru_A1954	0.54	-0.1
2,263,771	+		Rru_A1954	0.54	+0.5
2,263,772	-		Rru_A1954	0.55	+1.2
2,263,772	-		Rru_A1954	0.55	+2.2
2,263,772	-		Rru_A1954	0.55	+1.6
2,263,804	+		Rru_A1954	0.58	-0.1
2,264,392	+				+0.9
2,264,392	+				-0.1
2,264,661	+		Rru_A1955	0.52	-1.1
2,264,661	+		Rru_A1955	0.52	+0.7
2,264,662	-		Rru_A1955	0.52	-0.1
2,264,987	+				+2.9
2,264,987	+				+1.1
2,264,988	-				-0.1
2,264,988	-				+1.0
2,265,011	+		Rru_A1956	0.13	+1.2
2,265,012	-		Rru_A1956	0.13	+1.7
2,265,117	+		Rru_A1956	0.28	-0.1
2,265,118	-		Rru_A1956	0.28	+1.7
2,265,118	-		Rru_A1956	0.28	+2.7
2,265,221	-		Rru_A1956	0.43	+0.9
2,265,515	-		Rru_A1956	0.86	-0.5
2,265,608	+				+1.1
2,265,608	+				+1.0
2,265,609	-				+1.3
2,265,609	-				+1.1
2,265,755	+		Rru_A1957	0.15	+1.8
2,265,755	+		Rru_A1957	0.15	+1.7
2,265,755	+		Rru_A1957	0.15	+1.1
2,265,756	-		Rru_A1957	0.15	+1.2