Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1952

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,260,084	-				-0.6
2,260,113	+				+1.1
2,260,114	-				-0.1
2,260,114	-				+0.6
2,260,114	-				+1.4
2,260,121	-				+0.4
2,260,121	-				-0.1
2,260,121	-				+1.1
2,260,121	-				-0.1
2,260,133	+				+1.4
2,260,424	+		Rru_A1951	0.44	-0.1
2,260,425	-		Rru_A1951	0.44	+1.2
2,260,510	+		Rru_A1951	0.54	-0.1
2,260,510	+		Rru_A1951	0.54	+1.1
2,260,575	-		Rru_A1951	0.62	+1.5
2,260,575	-		Rru_A1951	0.62	-0.1
2,260,575	-		Rru_A1951	0.62	-0.1
2,260,575	-		Rru_A1951	0.62	-0.1
2,260,575	-		Rru_A1951	0.62	+0.6
2,260,590	+		Rru_A1951	0.64	+0.9
2,260,591	-		Rru_A1951	0.64	-0.1
2,260,622	-		Rru_A1951	0.68	+2.9
2,260,622	-		Rru_A1951	0.68	+1.5
2,260,622	-		Rru_A1951	0.68	-0.1
2,260,622	-		Rru_A1951	0.68	+0.7
2,260,625	+		Rru_A1951	0.68	+0.5
2,260,625	+		Rru_A1951	0.68	+1.6
2,260,625	+		Rru_A1951	0.68	+1.9
2,260,626	-		Rru_A1951	0.68	+1.1
2,260,626	-		Rru_A1951	0.68	+0.9
2,260,626	-		Rru_A1951	0.68	+0.7
2,260,626	-		Rru_A1951	0.68	+1.2
2,260,626	-		Rru_A1951	0.68	-0.1
2,260,951	+				+0.8
2,260,951	+				-0.1
2,260,952	-				+0.4
2,260,952	-				-0.1
2,260,952	-				+1.3
2,260,952	-				+0.8
2,260,954	+				-0.1
2,260,954	+				+1.1
2,260,954	+				+0.9
2,261,039	-				-0.1
2,261,116	-				+1.0
2,261,116	-				+1.2
2,261,118	+				+2.3
2,261,118	+				-0.1
2,261,118	+				-0.1
2,261,118	+				-0.1
2,261,119	-				-0.1
2,261,119	-				+1.7
2,261,172	+				-1.1
2,261,172	+				+1.1
2,261,172	+				+1.5
2,261,172	+				+1.1
2,261,172	+				-0.1
2,261,173	-				+0.9
2,261,173	-				+1.5
2,261,173	-				-0.1
2,261,174	+		Rru_A1952	0.10	-0.1
2,261,175	-		Rru_A1952	0.10	-0.1
2,261,175	-		Rru_A1952	0.10	+0.8
2,261,221	-		Rru_A1952	0.12	+0.9
2,261,370	+		Rru_A1952	0.19	+1.3
2,261,370	+		Rru_A1952	0.19	+0.1
2,261,370	+		Rru_A1952	0.19	+1.0
2,261,371	-		Rru_A1952	0.19	+1.4
2,261,371	-		Rru_A1952	0.19	+1.3
2,261,371	-		Rru_A1952	0.19	+2.9
2,261,391	+		Rru_A1952	0.20	+1.9
2,261,511	+		Rru_A1952	0.26	-0.1
2,261,511	+		Rru_A1952	0.26	-0.1
2,261,511	+		Rru_A1952	0.26	+0.4
2,261,512	-		Rru_A1952	0.26	-0.1
2,261,512	-		Rru_A1952	0.26	+0.7
2,261,688	+		Rru_A1952	0.34	+1.5
2,261,689	-		Rru_A1952	0.34	+1.1
2,261,689	-		Rru_A1952	0.34	+1.4
2,261,812	-		Rru_A1952	0.40	-0.1
2,262,111	+		Rru_A1952	0.54	-1.1
2,262,111	+		Rru_A1952	0.54	-0.1
2,262,111	+		Rru_A1952	0.54	-0.1
2,262,111	+		Rru_A1952	0.54	-0.1
2,262,111	+		Rru_A1952	0.54	+1.1
2,262,111	+		Rru_A1952	0.54	+1.2
2,262,112	-		Rru_A1952	0.54	+0.7
2,262,112	-		Rru_A1952	0.54	+2.0
2,262,112	-		Rru_A1952	0.54	+0.6
2,262,112	-		Rru_A1952	0.54	-0.1
2,262,112	-		Rru_A1952	0.54	+0.6
2,262,112	-		Rru_A1952	0.54	-0.1
2,262,112	-		Rru_A1952	0.54	+1.0
2,262,112	-		Rru_A1952	0.54	-0.1
2,262,112	-		Rru_A1952	0.54	-0.1
2,262,117	+		Rru_A1952	0.55	-0.1
2,262,118	-		Rru_A1952	0.55	+1.1
2,262,118	-		Rru_A1952	0.55	+1.4
2,262,244	+		Rru_A1952	0.61	+1.3
2,262,244	+		Rru_A1952	0.61	-0.1
2,262,245	-		Rru_A1952	0.61	+0.8
2,262,245	-		Rru_A1952	0.61	+1.2
2,262,297	+		Rru_A1952	0.63	-0.1
2,262,297	+		Rru_A1952	0.63	+0.8
2,262,297	+		Rru_A1952	0.63	-0.1
2,262,297	+		Rru_A1952	0.63	+1.1
2,262,297	+		Rru_A1952	0.63	-0.1
2,262,297	+		Rru_A1952	0.63	+0.6
2,262,297	+		Rru_A1952	0.63	+0.4
2,262,298	-		Rru_A1952	0.63	+0.7
2,262,298	-		Rru_A1952	0.63	-0.1
2,262,298	-		Rru_A1952	0.63	+1.4
2,262,298	-		Rru_A1952	0.63	-0.1
2,262,298	-		Rru_A1952	0.63	+1.2
2,262,298	-		Rru_A1952	0.63	+1.0
2,262,299	+		Rru_A1952	0.63	-0.1
2,262,299	+		Rru_A1952	0.63	-0.1
2,262,299	+		Rru_A1952	0.63	+1.3
2,262,300	-		Rru_A1952	0.63	+1.8
2,262,300	-		Rru_A1952	0.63	+0.8
2,262,315	+		Rru_A1952	0.64	-0.1
2,262,316	-		Rru_A1952	0.64	-1.6
2,262,316	-		Rru_A1952	0.64	-1.6
2,262,339	+		Rru_A1952	0.65	-0.1
2,262,339	+		Rru_A1952	0.65	+2.6
2,262,598	+		Rru_A1952	0.77	-0.1
2,262,599	-		Rru_A1952	0.77	-0.1
2,262,599	-		Rru_A1952	0.77	-1.1
2,262,635	-		Rru_A1952	0.79	-0.1
2,263,043	+				-0.1
2,263,044	-				+1.5
2,263,044	-				+0.7
2,263,044	-				-1.1
2,263,044	-				+1.1
2,263,186	+		Rru_A1953	0.54	+0.5
2,263,241	+		Rru_A1953	0.80	+0.9
2,263,241	+		Rru_A1953	0.80	-0.1
2,263,241	+		Rru_A1953	0.80	+0.9
2,263,242	-		Rru_A1953	0.80	+0.8
2,263,242	-		Rru_A1953	0.80	+0.5
2,263,315	+				+2.7
2,263,479	+		Rru_A1954	0.22	+1.3
2,263,486	+		Rru_A1954	0.23	+1.9
2,263,486	+		Rru_A1954	0.23	+1.1
2,263,486	+		Rru_A1954	0.23	+1.0
2,263,486	+		Rru_A1954	0.23	+1.2
2,263,486	+		Rru_A1954	0.23	+1.5
2,263,486	+		Rru_A1954	0.23	-0.1
2,263,487	-		Rru_A1954	0.23	+2.4
2,263,487	-		Rru_A1954	0.23	+1.3
2,263,487	-		Rru_A1954	0.23	+1.3
2,263,487	-		Rru_A1954	0.23	+3.4
2,263,487	-		Rru_A1954	0.23	+1.7
2,263,487	-		Rru_A1954	0.23	+1.5
2,263,487	-		Rru_A1954	0.23	-0.1
2,263,584	+		Rru_A1954	0.34	+0.6
2,263,584	+		Rru_A1954	0.34	-0.1
2,263,637	+		Rru_A1954	0.40	+0.7
2,263,637	+		Rru_A1954	0.40	+1.0
2,263,638	-		Rru_A1954	0.40	-0.1
2,263,638	-		Rru_A1954	0.40	+0.5
2,263,638	-		Rru_A1954	0.40	-0.1
2,263,771	+		Rru_A1954	0.54	+0.3
2,263,771	+		Rru_A1954	0.54	-0.1
2,263,771	+		Rru_A1954	0.54	+0.5
2,263,772	-		Rru_A1954	0.55	+1.2
2,263,772	-		Rru_A1954	0.55	+2.2
2,263,772	-		Rru_A1954	0.55	+1.6
2,263,804	+		Rru_A1954	0.58	-0.1