Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1943

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,250,815	+		Rru_A1942	0.46	+0.9
2,250,815	+		Rru_A1942	0.46	+1.4
2,250,816	-		Rru_A1942	0.47	+1.9
2,250,816	-		Rru_A1942	0.47	+0.9
2,250,816	-		Rru_A1942	0.47	+1.6
2,250,816	-		Rru_A1942	0.47	+2.1
2,250,816	-		Rru_A1942	0.47	-0.1
2,250,816	-		Rru_A1942	0.47	+1.1
2,250,929	+		Rru_A1942	0.60	-0.1
2,250,929	+		Rru_A1942	0.60	+1.8
2,251,401	+				-0.1
2,251,401	+				-0.1
2,251,401	+				-0.1
2,251,401	+				+2.3
2,251,402	-				+1.7
2,251,404	+				+0.7
2,251,405	-				-0.1
2,251,405	-				+2.1
2,251,425	+				+1.5
2,251,426	-				-0.1
2,251,593	+		Rru_A1943	0.20	+1.4
2,251,615	-		Rru_A1943	0.21	-1.1
2,251,615	-		Rru_A1943	0.21	-0.1
2,251,911	+		Rru_A1943	0.40	+0.8
2,251,911	+		Rru_A1943	0.40	+1.3
2,251,977	+		Rru_A1943	0.44	-0.1
2,251,977	+		Rru_A1943	0.44	-0.1
2,251,978	-		Rru_A1943	0.44	+0.9
2,251,978	-		Rru_A1943	0.44	+0.5
2,252,028	+		Rru_A1943	0.47	+1.8
2,252,028	+		Rru_A1943	0.47	-0.1
2,252,028	+		Rru_A1943	0.47	-0.1
2,252,029	-		Rru_A1943	0.47	+0.1
2,252,029	-		Rru_A1943	0.47	+1.4
2,252,029	-		Rru_A1943	0.47	-0.1
2,252,029	-		Rru_A1943	0.47	-0.1
2,252,136	+		Rru_A1943	0.54	-0.1
2,252,136	+		Rru_A1943	0.54	-0.1
2,252,137	-		Rru_A1943	0.54	-0.1
2,252,298	+		Rru_A1943	0.64	+1.3
2,252,299	-		Rru_A1943	0.64	+1.6
2,252,299	-		Rru_A1943	0.64	-0.1
2,252,299	-		Rru_A1943	0.64	+1.9
2,252,299	-		Rru_A1943	0.64	-0.1
2,252,377	-		Rru_A1943	0.69	+1.5
2,252,457	+		Rru_A1943	0.74	+1.4
2,252,527	-		Rru_A1943	0.78	+0.4
2,252,529	+		Rru_A1943	0.78	-0.1
2,252,529	+		Rru_A1943	0.78	-0.1
2,252,529	+		Rru_A1943	0.78	-0.1
2,252,529	+		Rru_A1943	0.78	+0.5
2,252,529	+		Rru_A1943	0.78	+0.9
2,252,529	+		Rru_A1943	0.78	+1.1
2,252,529	+		Rru_A1943	0.78	+1.2
2,252,529	+		Rru_A1943	0.78	-0.1
2,252,529	+		Rru_A1943	0.78	+0.4
2,252,529	+		Rru_A1943	0.78	+0.9
2,252,530	-		Rru_A1943	0.78	+1.2
2,252,530	-		Rru_A1943	0.78	+0.7
2,252,530	-		Rru_A1943	0.78	-0.1
2,252,530	-		Rru_A1943	0.78	+1.0
2,252,530	-		Rru_A1943	0.78	-0.1
2,252,907	-				+0.7
2,252,991	+				+1.5
2,253,005	-				+2.0
2,253,017	-				+1.3
2,253,243	+		Rru_A1944	0.42	+0.2
2,253,243	+		Rru_A1944	0.42	-0.1
2,253,243	+		Rru_A1944	0.42	+1.3
2,253,267	+		Rru_A1944	0.46	+0.8
2,253,353	+		Rru_A1944	0.60	+1.3
2,253,353	+		Rru_A1944	0.60	+0.7
2,253,354	-		Rru_A1944	0.60	+2.6
2,253,354	-		Rru_A1944	0.60	+1.4
2,253,354	-		Rru_A1944	0.60	+1.1
2,253,408	+		Rru_A1944	0.69	+0.9
2,253,408	+		Rru_A1944	0.69	+1.1
2,253,409	-		Rru_A1944	0.69	+0.8
2,253,409	-		Rru_A1944	0.69	+0.4
2,253,547	+				+0.4
2,253,547	+				+0.4
2,253,547	+				-0.1
2,253,547	+				-0.1
2,253,547	+				+1.8
2,253,547	+				-0.4
2,253,548	-				+0.7
2,253,548	-				-0.1
2,253,548	-				-0.1
2,253,548	-				+0.5
2,253,548	-				-0.1
2,253,548	-				+1.2
2,253,548	-				+1.9
2,253,548	-				+0.9
2,253,548	-				+0.9
2,253,549	+				-0.1
2,253,550	-				+2.0
2,253,570	+				+1.2
2,253,645	-				-0.1
2,253,645	-				-2.1
2,253,645	-				-0.2
2,253,735	-				-0.1
2,253,750	+				+0.5
2,253,774	+				-0.1
2,253,775	-				-0.1
2,253,775	-				+1.0
2,253,775	-				-0.1
2,253,775	-				+1.1
2,253,775	-				-0.1