Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1938

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,245,591	-		Rru_A1937	0.69	+0.6
2,245,900	-				-0.1
2,246,036	+				-0.1
2,246,036	+				-0.4
2,246,037	-				+0.9
2,246,037	-				-0.1
2,246,037	-				-0.1
2,246,049	-				+0.6
2,246,049	-				-1.1
2,246,084	-				+2.3
2,246,084	-				-0.1
2,246,084	-				+1.2
2,246,084	-				+0.5
2,246,267	+		Rru_A1938	0.27	+0.7
2,246,409	+		Rru_A1938	0.44	-0.6
2,246,463	-		Rru_A1938	0.50	+1.2
2,246,608	-		Rru_A1938	0.67	+0.6
2,246,608	-		Rru_A1938	0.67	-0.1
2,246,700	+		Rru_A1938	0.78	+0.2
2,246,701	-		Rru_A1938	0.78	+0.8
2,246,759	-		Rru_A1938	0.84	-0.1
2,246,911	+				+1.7
2,246,911	+				+1.0
2,246,912	-				-0.1
2,246,912	-				-0.6
2,246,989	+		Rru_A1939	0.18	+1.3
2,246,989	+		Rru_A1939	0.18	-0.1
2,246,989	+		Rru_A1939	0.18	+0.6
2,246,989	+		Rru_A1939	0.18	-0.1
2,246,990	-		Rru_A1939	0.18	+1.2
2,246,990	-		Rru_A1939	0.18	+0.5
2,246,990	-		Rru_A1939	0.18	+1.2
2,246,990	-		Rru_A1939	0.18	+2.5
2,246,990	-		Rru_A1939	0.18	+0.9
2,247,016	-		Rru_A1939	0.23	+2.7
2,247,097	+		Rru_A1939	0.36	-0.1
2,247,582	+		Rru_A1940	0.11	+1.8
2,247,582	+		Rru_A1940	0.11	-0.1
2,247,583	-		Rru_A1940	0.12	+2.0
2,247,621	-		Rru_A1940	0.16	+1.3
2,247,621	-		Rru_A1940	0.16	-0.1
2,247,621	-		Rru_A1940	0.16	-0.1
2,247,621	-		Rru_A1940	0.16	-0.1
2,247,621	-		Rru_A1940	0.16	+1.4
2,247,621	-		Rru_A1940	0.16	-0.1
2,247,621	-		Rru_A1940	0.16	+2.0
2,247,622	+		Rru_A1940	0.16	-0.1
2,247,622	+		Rru_A1940	0.16	-0.1
2,247,622	+		Rru_A1940	0.16	-0.1
2,247,622	+		Rru_A1940	0.16	+2.3
2,247,622	+		Rru_A1940	0.16	+2.3
2,247,623	-		Rru_A1940	0.16	-0.1
2,247,623	-		Rru_A1940	0.16	+1.2
2,247,623	-		Rru_A1940	0.16	+1.9
2,247,757	+		Rru_A1940	0.31	+1.4
2,247,757	+		Rru_A1940	0.31	-0.1
2,247,757	+		Rru_A1940	0.31	-0.1
2,247,758	-		Rru_A1940	0.31	+2.1
2,247,758	-		Rru_A1940	0.31	-0.1
2,247,758	-		Rru_A1940	0.31	+1.8
2,247,758	-		Rru_A1940	0.31	-1.6
2,247,758	-		Rru_A1940	0.31	+1.3
2,247,758	-		Rru_A1940	0.31	-0.1