Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1919

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,223,129	+		Rru_A1918	0.20	+0.7
2,223,129	+		Rru_A1918	0.20	+1.2
2,223,130	-		Rru_A1918	0.20	+1.1
2,223,130	-		Rru_A1918	0.20	-1.1
2,223,303	-		Rru_A1918	0.37	+1.1
2,223,303	-		Rru_A1918	0.37	-0.1
2,223,393	+		Rru_A1918	0.46	-0.1
2,223,393	+		Rru_A1918	0.46	+0.7
2,223,393	+		Rru_A1918	0.46	+1.7
2,223,442	-		Rru_A1918	0.51	+1.3
2,223,562	-		Rru_A1918	0.63	+1.5
2,223,564	+		Rru_A1918	0.63	+1.8
2,223,564	+		Rru_A1918	0.63	+1.0
2,223,565	-		Rru_A1918	0.63	+0.6
2,223,576	+		Rru_A1918	0.64	-0.1
2,223,576	+		Rru_A1918	0.64	+1.3
2,223,577	-		Rru_A1918	0.64	+1.3
2,223,577	-		Rru_A1918	0.64	+1.2
2,223,577	-		Rru_A1918	0.64	+0.3
2,223,577	-		Rru_A1918	0.64	-0.1
2,223,577	-		Rru_A1918	0.64	-0.1
2,223,578	+		Rru_A1918	0.65	+1.9
2,223,578	+		Rru_A1918	0.65	+1.0
2,223,578	+		Rru_A1918	0.65	+0.9
2,223,579	-		Rru_A1918	0.65	+1.7
2,223,627	+		Rru_A1918	0.69	-0.1
2,223,627	+		Rru_A1918	0.69	+0.9
2,223,627	+		Rru_A1918	0.69	+1.3
2,223,627	+		Rru_A1918	0.69	-0.1
2,223,627	+		Rru_A1918	0.69	+1.5
2,223,627	+		Rru_A1918	0.69	+0.8
2,223,628	-		Rru_A1918	0.70	+2.0
2,223,628	-		Rru_A1918	0.70	+1.2
2,223,628	-		Rru_A1918	0.70	+0.5
2,223,732	+		Rru_A1918	0.80	-0.1
2,223,733	-		Rru_A1918	0.80	+0.7
2,223,733	-		Rru_A1918	0.80	+1.3
2,223,733	-		Rru_A1918	0.80	+0.7
2,223,733	-		Rru_A1918	0.80	+1.1
2,223,798	+		Rru_A1918	0.87	-0.1
2,223,798	+		Rru_A1918	0.87	+2.3
2,223,798	+		Rru_A1918	0.87	+0.8
2,223,798	+		Rru_A1918	0.87	+0.5
2,223,798	+		Rru_A1918	0.87	+0.9
2,223,798	+		Rru_A1918	0.87	+2.1
2,223,799	-		Rru_A1918	0.87	-0.1
2,223,799	-		Rru_A1918	0.87	+1.3
2,223,799	-		Rru_A1918	0.87	-0.1
2,223,799	-		Rru_A1918	0.87	+1.3
2,223,884	+				+1.7
2,223,884	+				-0.1
2,223,885	-				+0.5
2,223,885	-				+3.8
2,223,885	-				-0.1
2,224,041	-		Rru_A1919	0.12	+1.8
2,224,041	-		Rru_A1919	0.12	-0.3
2,224,102	-		Rru_A1919	0.18	+2.6
2,224,102	-		Rru_A1919	0.18	+1.5
2,224,231	+		Rru_A1919	0.32	+1.9
2,224,232	-		Rru_A1919	0.32	+2.7
2,224,490	+		Rru_A1919	0.60	+0.3
2,224,490	+		Rru_A1919	0.60	-0.8
2,224,491	-		Rru_A1919	0.60	+0.9
2,224,775	+				+0.7
2,224,862	+				-0.1
2,225,165	+		Rru_A1920	0.36	+2.1
2,225,166	-		Rru_A1920	0.36	+1.2
2,225,603	+		Rru_A1920	0.88	+0.4
2,225,603	+		Rru_A1920	0.88	+0.4
2,225,603	+		Rru_A1920	0.88	+1.1
2,225,604	-		Rru_A1920	0.89	-0.1
2,225,604	-		Rru_A1920	0.89	+0.7
2,225,604	-		Rru_A1920	0.89	+0.8