Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1912

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,215,833	+		Rru_A1910	0.83	-0.1
2,215,833	+		Rru_A1910	0.83	-0.1
2,215,834	-		Rru_A1910	0.83	+0.7
2,215,866	+		Rru_A1910	0.85	-0.1
2,215,867	-		Rru_A1910	0.85	-1.1
2,215,965	+				-0.1
2,215,965	+				+1.7
2,215,966	-				+0.5
2,215,966	-				-1.1
2,216,355	-		Rru_A1911	0.50	+0.8
2,216,415	-		Rru_A1911	0.62	+0.8
2,216,415	-		Rru_A1911	0.62	+1.1
2,216,415	-		Rru_A1911	0.62	+1.0
2,216,449	+		Rru_A1911	0.68	+0.8
2,216,649	+				-0.1
2,216,649	+				+0.4
2,216,649	+				+0.8
2,216,649	+				-0.3
2,216,649	+				+0.8
2,216,649	+				-1.1
2,216,649	+				-0.1
2,216,649	+				-0.1
2,216,650	-				+0.4
2,216,650	-				+1.7
2,216,650	-				+0.9
2,216,650	-				+0.9
2,216,652	-				+1.0
2,216,738	+				-0.1
2,216,739	-				+1.2
2,216,740	+				+0.2
2,216,740	+				+0.4
2,216,740	+				-0.1
2,217,141	+		Rru_A1912	0.45	+2.1
2,217,266	-		Rru_A1912	0.62	+3.1
2,217,266	-		Rru_A1912	0.62	+0.8
2,217,266	-		Rru_A1912	0.62	+1.9
2,217,266	-		Rru_A1912	0.62	-0.1
2,217,548	-				+1.3
2,217,560	+				+1.2
2,217,779	+		Rru_A1913	0.23	-0.1
2,217,780	-		Rru_A1913	0.23	+1.5
2,217,780	-		Rru_A1913	0.23	-0.1
2,217,780	-		Rru_A1913	0.23	+0.8
2,217,780	-		Rru_A1913	0.23	-1.1
2,218,085	+		Rru_A1913	0.57	-0.1
2,218,085	+		Rru_A1913	0.57	-0.1
2,218,085	+		Rru_A1913	0.57	+1.8
2,218,342	+		Rru_A1913	0.86	-0.1
2,218,342	+		Rru_A1913	0.86	-0.1
2,218,342	+		Rru_A1913	0.86	-0.1
2,218,343	-		Rru_A1913	0.86	+1.2
2,218,343	-		Rru_A1913	0.86	+0.9
2,218,420	+				-1.1
2,218,421	-				-0.1
2,218,423	+				+0.5
2,218,423	+				+1.9
2,218,424	-				+0.5