Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1866

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,161,856	-		Rru_A1865	0.31	-0.1
2,161,856	-		Rru_A1865	0.31	-0.1
2,161,994	-		Rru_A1865	0.47	-0.1
2,162,068	-		Rru_A1865	0.55	-0.1
2,162,068	-		Rru_A1865	0.55	-0.1
2,162,068	-		Rru_A1865	0.55	-0.1
2,162,068	-		Rru_A1865	0.55	-0.1
2,162,122	-		Rru_A1865	0.61	+0.5
2,162,147	-		Rru_A1865	0.64	-0.1
2,162,147	-		Rru_A1865	0.64	-0.1
2,162,147	-		Rru_A1865	0.64	-0.1
2,162,147	-		Rru_A1865	0.64	+0.3
2,162,147	-		Rru_A1865	0.64	-0.1
2,162,149	-		Rru_A1865	0.64	-0.1
2,162,149	-		Rru_A1865	0.64	-0.1
2,162,149	-		Rru_A1865	0.64	-0.7
2,162,149	-		Rru_A1865	0.64	-0.1
2,162,476	+				-0.1
2,162,476	+				-0.5
2,162,480	-				+2.1
2,162,480	-				+1.4
2,162,480	-				-0.1
2,162,480	-				-0.1
2,162,480	-				+1.3
2,162,480	-				-0.1
2,162,527	-				-0.1
2,162,555	+				-0.1
2,162,556	-				+1.7
2,162,556	-				+1.1
2,162,556	-				+2.4
2,162,556	-				-0.1
2,162,556	-				+2.0
2,162,556	-				-0.1
2,162,558	-				-0.1
2,162,853	+				-0.1
2,162,854	-				+0.5
2,162,854	-				-0.3
2,162,854	-				-0.1
2,162,854	-				+1.0
2,162,854	-				-1.6
2,162,854	-				-0.1
2,163,168	+		Rru_A1866	0.20	-0.1
2,163,270	+		Rru_A1866	0.25	-0.1
2,163,270	+		Rru_A1866	0.25	+2.1
2,163,271	-		Rru_A1866	0.25	+0.3
2,163,271	-		Rru_A1866	0.25	-0.1
2,163,271	-		Rru_A1866	0.25	-1.1
2,163,646	-		Rru_A1866	0.44	+0.1
2,163,646	-		Rru_A1866	0.44	-0.1
2,163,774	+		Rru_A1866	0.51	-0.6
2,163,774	+		Rru_A1866	0.51	-0.3
2,163,774	+		Rru_A1866	0.51	-0.1
2,163,775	-		Rru_A1866	0.51	-0.1
2,163,775	-		Rru_A1866	0.51	-0.1
2,163,817	-		Rru_A1866	0.53	+0.9
2,163,873	+		Rru_A1866	0.56	-0.1
2,163,906	+		Rru_A1866	0.57	+0.1
2,163,906	+		Rru_A1866	0.57	-0.1
2,163,906	+		Rru_A1866	0.57	-0.1
2,164,200	+		Rru_A1866	0.72	-0.6
2,164,200	+		Rru_A1866	0.72	-0.1
2,164,200	+		Rru_A1866	0.72	-0.9
2,164,200	+		Rru_A1866	0.72	-0.1
2,164,201	-		Rru_A1866	0.72	-0.1
2,164,201	-		Rru_A1866	0.72	-0.1
2,164,370	+		Rru_A1866	0.81	-0.1
2,164,370	+		Rru_A1866	0.81	-0.1
2,164,371	-		Rru_A1866	0.81	+0.7
2,164,450	-		Rru_A1866	0.85	-0.1
2,164,473	+		Rru_A1866	0.86	-1.2
2,164,474	-		Rru_A1866	0.86	+0.9
2,164,533	-		Rru_A1866	0.89	-0.1
2,164,650	+				-0.1
2,164,650	+				-0.4
2,164,651	-				-0.1
2,164,651	-				+0.4
2,164,683	+				-1.4
2,164,756	-				-0.1
2,165,308	+		Rru_A1867	0.88	+0.7
2,165,425	+				+1.2
2,165,425	+				-0.1
2,165,426	-				-0.1
2,165,426	-				+1.6
2,165,456	+				+0.7
2,165,541	-		Rru_A1868	0.14	-0.1
2,165,581	+		Rru_A1868	0.17	+1.0
2,165,581	+		Rru_A1868	0.17	+1.2
2,165,581	+		Rru_A1868	0.17	+2.9
2,165,582	-		Rru_A1868	0.17	+2.5
2,165,602	+		Rru_A1868	0.18	+0.9
2,165,640	-		Rru_A1868	0.21	-0.1
2,165,732	-		Rru_A1868	0.28	-1.1
2,165,732	-		Rru_A1868	0.28	+1.5