Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1845

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,142,704	+		Rru_A1843	0.66	-0.1
2,142,705	-		Rru_A1843	0.66	-0.1
2,142,725	+		Rru_A1843	0.68	+1.3
2,142,741	+		Rru_A1843	0.70	-0.4
2,142,743	+		Rru_A1843	0.70	+0.4
2,142,743	+		Rru_A1843	0.70	-0.1
2,142,744	-		Rru_A1843	0.70	+1.1
2,142,948	+		Rru_A1843	0.89	+1.5
2,142,949	-		Rru_A1843	0.89	+0.5
2,142,949	-		Rru_A1843	0.89	-0.1
2,143,148	-		Rru_A1844	0.16	+1.3
2,143,175	+		Rru_A1844	0.21	-0.1
2,143,175	+		Rru_A1844	0.21	-0.4
2,143,175	+		Rru_A1844	0.21	+3.6
2,143,175	+		Rru_A1844	0.21	+1.6
2,143,176	-		Rru_A1844	0.21	+1.0
2,143,403	+		Rru_A1844	0.64	-0.1
2,143,403	+		Rru_A1844	0.64	+1.4
2,143,403	+		Rru_A1844	0.64	+3.6
2,143,403	+		Rru_A1844	0.64	+0.7
2,143,403	+		Rru_A1844	0.64	+1.9
2,143,403	+		Rru_A1844	0.64	+0.8
2,143,403	+		Rru_A1844	0.64	+1.4
2,143,403	+		Rru_A1844	0.64	+0.8
2,143,403	+		Rru_A1844	0.64	-0.1
2,143,403	+		Rru_A1844	0.64	+1.2
2,143,403	+		Rru_A1844	0.64	-0.1
2,143,404	-		Rru_A1844	0.65	+0.5
2,143,404	-		Rru_A1844	0.65	+0.6
2,143,404	-		Rru_A1844	0.65	-0.1
2,143,405	+		Rru_A1844	0.65	+1.6
2,143,419	+		Rru_A1844	0.67	+0.8
2,143,419	+		Rru_A1844	0.67	-0.1
2,143,420	-		Rru_A1844	0.68	+2.2
2,143,586	+				+0.3
2,143,643	-				+2.5
2,143,706	+				-0.1
2,143,707	-				-0.1
2,143,820	+		Rru_A1845	0.24	-0.1
2,143,820	+		Rru_A1845	0.24	-0.1
2,143,821	-		Rru_A1845	0.24	-0.4
2,143,940	+		Rru_A1845	0.40	+0.0
2,143,988	+		Rru_A1845	0.47	-0.1
2,143,988	+		Rru_A1845	0.47	+0.3
2,144,162	+		Rru_A1845	0.70	+1.2
2,144,162	+		Rru_A1845	0.70	+0.7
2,144,163	-		Rru_A1845	0.70	-0.1
2,144,177	-		Rru_A1845	0.72	+0.5
2,144,264	+		Rru_A1845	0.84	-0.1
2,144,265	-		Rru_A1845	0.84	+1.2
2,144,273	+		Rru_A1845	0.85	+0.0
2,144,304	-		Rru_A1845	0.89	-0.6
2,144,511	+				+0.9
2,144,511	+				+1.0
2,144,591	+		Rru_A1846	0.12	+0.9
2,144,591	+		Rru_A1846	0.12	+0.6
2,144,592	-		Rru_A1846	0.12	+0.4
2,144,672	+		Rru_A1846	0.19	+0.5
2,144,673	-		Rru_A1846	0.20	+1.5
2,144,741	+		Rru_A1846	0.26	+0.2
2,144,742	-		Rru_A1846	0.26	+0.9
2,144,742	-		Rru_A1846	0.26	+2.0
2,144,759	+		Rru_A1846	0.27	+1.7
2,144,759	+		Rru_A1846	0.27	-1.1
2,144,760	-		Rru_A1846	0.27	-0.1
2,145,155	+		Rru_A1846	0.64	+0.9
2,145,155	+		Rru_A1846	0.64	+0.8
2,145,156	-		Rru_A1846	0.64	+2.4
2,145,156	-		Rru_A1846	0.64	+0.4
2,145,158	+		Rru_A1846	0.64	+1.1
2,145,158	+		Rru_A1846	0.64	+1.0
2,145,158	+		Rru_A1846	0.64	+2.0
2,145,158	+		Rru_A1846	0.64	+1.1
2,145,159	-		Rru_A1846	0.64	+1.0
2,145,159	-		Rru_A1846	0.64	+0.5
2,145,159	-		Rru_A1846	0.64	+0.3
2,145,159	-		Rru_A1846	0.64	-0.1
2,145,159	-		Rru_A1846	0.64	-0.1
2,145,159	-		Rru_A1846	0.64	+2.1
2,145,161	+		Rru_A1846	0.64	-0.1
2,145,161	+		Rru_A1846	0.64	-0.1
2,145,161	+		Rru_A1846	0.64	+1.2
2,145,161	+		Rru_A1846	0.64	-0.1
2,145,161	+		Rru_A1846	0.64	+1.5
2,145,161	+		Rru_A1846	0.64	-2.1
2,145,161	+		Rru_A1846	0.64	+0.4
2,145,164	+		Rru_A1846	0.64	-0.1
2,145,165	-		Rru_A1846	0.64	-1.7
2,145,286	+		Rru_A1846	0.76	-0.1
2,145,287	-		Rru_A1846	0.76	+0.6
2,145,287	-		Rru_A1846	0.76	+0.6
2,145,287	-		Rru_A1846	0.76	-0.1
2,145,287	-		Rru_A1846	0.76	+1.6
2,145,287	-		Rru_A1846	0.76	-0.1
2,145,299	+		Rru_A1846	0.77	-0.1
2,145,299	+		Rru_A1846	0.77	-0.1
2,145,299	+		Rru_A1846	0.77	+0.6
2,145,300	-		Rru_A1846	0.77	+1.4
2,145,328	+		Rru_A1846	0.79	+0.9