Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1843

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,141,002	-				-0.1
2,141,018	+				-0.4
2,141,018	+				-0.1
2,141,018	+				+0.7
2,141,018	+				+0.9
2,141,018	+				+2.0
2,141,019	-				+0.3
2,141,083	+				+0.7
2,141,301	+		Rru_A1842	0.26	+0.8
2,141,301	+		Rru_A1842	0.26	+1.7
2,141,302	-		Rru_A1842	0.26	+0.4
2,141,302	-		Rru_A1842	0.26	+0.9
2,141,302	-		Rru_A1842	0.26	-0.1
2,141,302	-		Rru_A1842	0.26	-0.1
2,141,325	+		Rru_A1842	0.29	+3.1
2,141,325	+		Rru_A1842	0.29	-0.1
2,141,325	+		Rru_A1842	0.29	+1.3
2,141,325	+		Rru_A1842	0.29	+1.6
2,141,326	-		Rru_A1842	0.29	-0.1
2,141,441	+		Rru_A1842	0.42	+1.8
2,141,441	+		Rru_A1842	0.42	-0.1
2,141,442	-		Rru_A1842	0.42	+1.0
2,141,442	-		Rru_A1842	0.42	-0.1
2,141,559	-		Rru_A1842	0.56	-1.7
2,141,559	-		Rru_A1842	0.56	+0.7
2,141,606	+		Rru_A1842	0.61	-0.1
2,141,607	-		Rru_A1842	0.62	-0.1
2,141,637	-		Rru_A1842	0.65	-0.1
2,141,637	-		Rru_A1842	0.65	-0.1
2,141,728	-		Rru_A1842	0.76	-0.1
2,141,728	-		Rru_A1842	0.76	+0.4
2,141,788	-		Rru_A1842	0.83	+0.6
2,141,788	-		Rru_A1842	0.83	+1.7
2,141,822	+		Rru_A1842	0.87	+1.8
2,141,823	-		Rru_A1842	0.87	+0.9
2,141,823	-		Rru_A1842	0.87	+0.3
2,141,823	-		Rru_A1842	0.87	+1.4
2,141,832	+		Rru_A1842	0.88	+2.2
2,141,832	+		Rru_A1842	0.88	+0.5
2,141,832	+		Rru_A1842	0.88	-0.1
2,141,934	+				+1.0
2,141,935	-				-0.6
2,142,066	+				+1.2
2,142,704	+		Rru_A1843	0.66	-0.1
2,142,705	-		Rru_A1843	0.66	-0.1
2,142,725	+		Rru_A1843	0.68	+1.3
2,142,741	+		Rru_A1843	0.70	-0.4
2,142,743	+		Rru_A1843	0.70	+0.4
2,142,743	+		Rru_A1843	0.70	-0.1
2,142,744	-		Rru_A1843	0.70	+1.1
2,142,948	+		Rru_A1843	0.89	+1.5
2,142,949	-		Rru_A1843	0.89	+0.5
2,142,949	-		Rru_A1843	0.89	-0.1
2,143,148	-		Rru_A1844	0.16	+1.3
2,143,175	+		Rru_A1844	0.21	-0.1
2,143,175	+		Rru_A1844	0.21	-0.4
2,143,175	+		Rru_A1844	0.21	+3.6
2,143,175	+		Rru_A1844	0.21	+1.6
2,143,176	-		Rru_A1844	0.21	+1.0
2,143,403	+		Rru_A1844	0.64	-0.1
2,143,403	+		Rru_A1844	0.64	+1.4
2,143,403	+		Rru_A1844	0.64	+3.6
2,143,403	+		Rru_A1844	0.64	+0.7
2,143,403	+		Rru_A1844	0.64	+1.9
2,143,403	+		Rru_A1844	0.64	+0.8
2,143,403	+		Rru_A1844	0.64	+1.4
2,143,403	+		Rru_A1844	0.64	+0.8
2,143,403	+		Rru_A1844	0.64	-0.1
2,143,403	+		Rru_A1844	0.64	+1.2
2,143,403	+		Rru_A1844	0.64	-0.1
2,143,404	-		Rru_A1844	0.65	+0.5
2,143,404	-		Rru_A1844	0.65	+0.6
2,143,404	-		Rru_A1844	0.65	-0.1
2,143,405	+		Rru_A1844	0.65	+1.6
2,143,419	+		Rru_A1844	0.67	+0.8
2,143,419	+		Rru_A1844	0.67	-0.1
2,143,420	-		Rru_A1844	0.68	+2.2
2,143,586	+				+0.3
2,143,643	-				+2.5
2,143,706	+				-0.1
2,143,707	-				-0.1
2,143,820	+		Rru_A1845	0.24	-0.1
2,143,820	+		Rru_A1845	0.24	-0.1
2,143,821	-		Rru_A1845	0.24	-0.4
2,143,940	+		Rru_A1845	0.40	+0.0
2,143,988	+		Rru_A1845	0.47	-0.1
2,143,988	+		Rru_A1845	0.47	+0.3