Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1833

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,129,130	+		Rru_A1832	0.15	-1.1
2,129,130	+		Rru_A1832	0.15	+0.7
2,129,317	+		Rru_A1832	0.45	+1.2
2,129,317	+		Rru_A1832	0.45	-0.1
2,129,317	+		Rru_A1832	0.45	-0.1
2,129,319	+		Rru_A1832	0.45	-0.1
2,129,319	+		Rru_A1832	0.45	+1.1
2,129,319	+		Rru_A1832	0.45	+1.7
2,129,319	+		Rru_A1832	0.45	-0.1
2,129,319	+		Rru_A1832	0.45	+1.4
2,129,319	+		Rru_A1832	0.45	+1.7
2,129,320	-		Rru_A1832	0.45	+1.6
2,129,320	-		Rru_A1832	0.45	-0.1
2,129,320	-		Rru_A1832	0.45	-0.1
2,129,320	-		Rru_A1832	0.45	-0.1
2,129,320	-		Rru_A1832	0.45	-0.1
2,129,409	+		Rru_A1832	0.59	-0.1
2,129,410	-		Rru_A1832	0.60	-0.1
2,129,463	+		Rru_A1832	0.68	-0.1
2,129,463	+		Rru_A1832	0.68	-0.1
2,129,546	-		Rru_A1832	0.81	+2.2
2,129,547	+		Rru_A1832	0.81	+0.8
2,129,547	+		Rru_A1832	0.81	-0.1
2,129,547	+		Rru_A1832	0.81	+1.0
2,129,547	+		Rru_A1832	0.81	+0.9
2,129,548	-		Rru_A1832	0.81	-0.1
2,129,548	-		Rru_A1832	0.81	-1.0
2,129,548	-		Rru_A1832	0.81	-0.1
2,129,548	-		Rru_A1832	0.81	-0.1
2,129,548	-		Rru_A1832	0.81	+1.0
2,129,602	-				-1.1
2,129,602	-				-0.1
2,129,604	+				+0.9
2,129,605	-				+2.1
2,129,815	+				-0.1
2,129,815	+				-1.1
2,129,815	+				+0.7
2,129,816	-				-1.1
2,129,820	+				-0.1
2,129,973	+				+2.2
2,129,978	+				-0.3
2,129,978	+				-0.1
2,129,979	-				-1.1
2,129,979	-				+1.5
2,129,987	+				-0.1
2,130,099	-		Rru_A1833	0.21	+0.8
2,130,146	+		Rru_A1833	0.26	-0.5
2,130,146	+		Rru_A1833	0.26	+1.4
2,130,146	+		Rru_A1833	0.26	-1.1
2,130,146	+		Rru_A1833	0.26	-0.6
2,130,147	-		Rru_A1833	0.26	+1.6
2,130,147	-		Rru_A1833	0.26	-0.1
2,130,147	-		Rru_A1833	0.26	+1.2
2,130,147	-		Rru_A1833	0.26	-0.1
2,130,147	-		Rru_A1833	0.26	+2.1
2,130,147	-		Rru_A1833	0.26	+0.3
2,130,403	+		Rru_A1833	0.55	-0.1
2,130,404	-		Rru_A1833	0.55	-0.1
2,130,404	-		Rru_A1833	0.55	-1.7
2,130,579	-		Rru_A1833	0.75	-0.1
2,130,818	+				+1.1
2,130,819	-				-0.1
2,130,828	+				-0.1
2,131,009	-		Rru_A1834	0.17	+0.9
2,131,009	-		Rru_A1834	0.17	-0.1
2,131,349	-		Rru_A1834	0.48	-0.1
2,131,416	+		Rru_A1834	0.55	+1.7
2,131,417	-		Rru_A1834	0.55	-1.0
2,131,452	+		Rru_A1834	0.58	-0.2
2,131,452	+		Rru_A1834	0.58	+0.2
2,131,453	-		Rru_A1834	0.58	+2.7
2,131,593	+		Rru_A1834	0.71	+1.3
2,131,593	+		Rru_A1834	0.71	+1.4
2,131,594	-		Rru_A1834	0.71	+1.7
2,131,594	-		Rru_A1834	0.71	-1.7
2,131,594	-		Rru_A1834	0.71	-0.1
2,131,606	-		Rru_A1834	0.72	+0.9
2,131,606	-		Rru_A1834	0.72	+0.5
2,131,765	+		Rru_A1834	0.87	+0.6
2,131,765	+		Rru_A1834	0.87	-0.1
2,131,766	-		Rru_A1834	0.87	+0.9