Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1829

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,127,138	+				+3.1
2,127,138	+				+2.1
2,127,139	-				+1.1
2,127,215	-				-0.1
2,127,400	+				-0.1
2,127,492	+				+0.5
2,127,493	-				-1.1
2,127,521	+				-0.1
2,127,521	+				+0.9
2,127,522	-				+1.0
2,127,533	+				-0.1
2,127,566	+				-0.1
2,127,566	+				-0.4
2,127,577	+		Rru_A1829	0.12	+0.5
2,127,594	+		Rru_A1829	0.16	+0.4
2,127,594	+		Rru_A1829	0.16	+2.3
2,127,594	+		Rru_A1829	0.16	+1.1
2,127,594	+		Rru_A1829	0.16	+0.7
2,127,594	+		Rru_A1829	0.16	-0.1
2,127,598	+		Rru_A1829	0.17	-0.1
2,127,598	+		Rru_A1829	0.17	+1.5
2,127,598	+		Rru_A1829	0.17	-1.1
2,127,599	-		Rru_A1829	0.18	+0.7
2,127,599	-		Rru_A1829	0.18	-0.1
2,127,599	-		Rru_A1829	0.18	-0.1
2,127,599	-		Rru_A1829	0.18	+1.5
2,127,599	-		Rru_A1829	0.18	-0.4
2,127,747	+		Rru_A1829	0.53	-1.7
2,127,747	+		Rru_A1829	0.53	-0.1
2,127,748	-		Rru_A1829	0.53	-0.1
2,127,748	-		Rru_A1829	0.53	-0.1
2,127,810	+		Rru_A1829	0.68	-0.1
2,127,810	+		Rru_A1829	0.68	-0.1
2,127,810	+		Rru_A1829	0.68	-0.1
2,127,811	-		Rru_A1829	0.68	-0.5
2,127,882	+		Rru_A1829	0.85	-1.1
2,127,882	+		Rru_A1829	0.85	+0.9
2,127,882	+		Rru_A1829	0.85	-1.0
2,127,882	+		Rru_A1829	0.85	+1.1
2,127,882	+		Rru_A1829	0.85	-0.3
2,127,882	+		Rru_A1829	0.85	+0.4
2,127,882	+		Rru_A1829	0.85	+0.7
2,127,883	-		Rru_A1829	0.85	+0.3
2,127,883	-		Rru_A1829	0.85	-0.1
2,127,883	-		Rru_A1829	0.85	-0.1
2,127,883	-		Rru_A1829	0.85	+0.4
2,127,883	-		Rru_A1829	0.85	-0.1
2,127,883	-		Rru_A1829	0.85	-0.1
2,127,883	-		Rru_A1829	0.85	-0.1
2,127,942	+				-1.1
2,127,943	-				-0.5
2,128,087	-				+3.2
2,128,205	+		Rru_A1830	0.33	+0.5
2,128,361	+				+0.3
2,128,362	-				+1.0
2,128,422	-				+1.2
2,128,422	-				+0.6
2,128,640	+		Rru_A1831	0.41	+1.6
2,128,640	+		Rru_A1831	0.41	-0.1
2,128,640	+		Rru_A1831	0.41	+0.1
2,128,640	+		Rru_A1831	0.41	-0.1
2,128,640	+		Rru_A1831	0.41	-1.1
2,128,640	+		Rru_A1831	0.41	+0.9
2,128,640	+		Rru_A1831	0.41	+0.7
2,128,641	-		Rru_A1831	0.41	+1.1
2,128,641	-		Rru_A1831	0.41	-0.1
2,128,641	-		Rru_A1831	0.41	-0.1
2,128,641	-		Rru_A1831	0.41	+3.3
2,128,641	-		Rru_A1831	0.41	-1.1
2,128,733	+		Rru_A1831	0.57	+0.4
2,128,733	+		Rru_A1831	0.57	+1.5
2,128,733	+		Rru_A1831	0.57	+1.5
2,128,733	+		Rru_A1831	0.57	+2.7
2,128,733	+		Rru_A1831	0.57	+0.2
2,128,734	-		Rru_A1831	0.57	-0.1
2,128,734	-		Rru_A1831	0.57	-1.1
2,128,734	-		Rru_A1831	0.57	+1.7
2,128,734	-		Rru_A1831	0.57	+1.0