Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1803

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,096,252	+		Rru_A1802	0.64	+0.7
2,096,294	+		Rru_A1802	0.67	+0.6
2,096,375	-		Rru_A1802	0.73	+3.9
2,096,401	+		Rru_A1802	0.75	-0.1
2,096,402	-		Rru_A1802	0.75	-0.7
2,096,413	+		Rru_A1802	0.76	+1.6
2,096,413	+		Rru_A1802	0.76	+1.1
2,096,413	+		Rru_A1802	0.76	-0.1
2,096,413	+		Rru_A1802	0.76	-0.1
2,096,413	+		Rru_A1802	0.76	+1.0
2,096,413	+		Rru_A1802	0.76	+2.2
2,096,414	-		Rru_A1802	0.76	+1.1
2,096,414	-		Rru_A1802	0.76	-0.1
2,096,782	+				+2.1
2,096,782	+				+1.8
2,096,782	+				+1.0
2,096,782	+				+0.3
2,096,782	+				-0.1
2,096,783	-				+0.8
2,096,783	-				+0.6
2,096,783	-				-0.1
2,096,874	-				-0.1
2,097,281	+		Rru_A1803	0.12	-1.1
2,097,282	-		Rru_A1803	0.13	-0.1
2,097,358	-		Rru_A1803	0.22	-0.1
2,097,358	-		Rru_A1803	0.22	-0.1
2,097,384	+		Rru_A1803	0.25	-0.1
2,097,385	-		Rru_A1803	0.25	-0.9
2,097,385	-		Rru_A1803	0.25	-0.1
2,097,386	+		Rru_A1803	0.25	-0.1
2,097,387	-		Rru_A1803	0.25	-0.1
2,097,387	-		Rru_A1803	0.25	+2.2
2,097,395	+		Rru_A1803	0.26	-2.1
2,097,396	-		Rru_A1803	0.26	-1.1
2,097,812	+		Rru_A1803	0.77	-0.1
2,097,991	+				-0.1
2,097,992	-				-0.1
2,098,154	+				+1.3
2,098,176	+				+1.4
2,098,228	-				+2.0
2,098,228	-				-0.1
2,098,228	-				-2.1
2,098,461	+				-0.1
2,098,461	+				-0.1
2,098,461	+				-0.1
2,098,489	-				-0.1
2,098,489	-				-0.1
2,098,592	+		Rru_A1804	0.12	-0.1
2,098,592	+		Rru_A1804	0.12	-0.1
2,098,593	-		Rru_A1804	0.12	-0.1
2,098,688	+		Rru_A1804	0.15	-0.1
2,098,689	-		Rru_A1804	0.15	-0.1
2,098,689	-		Rru_A1804	0.15	-0.1
2,098,712	+		Rru_A1804	0.16	-0.1
2,098,713	-		Rru_A1804	0.16	-0.1
2,098,713	-		Rru_A1804	0.16	-0.8
2,098,918	-		Rru_A1804	0.24	-0.1
2,098,918	-		Rru_A1804	0.24	-0.1
2,098,956	+		Rru_A1804	0.25	-0.1
2,098,957	-		Rru_A1804	0.25	-0.1
2,098,957	-		Rru_A1804	0.25	-0.1