Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1735

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,027,842	+		Rru_A1733	0.54	+1.0
2,027,917	-		Rru_A1733	0.61	-0.1
2,027,917	-		Rru_A1733	0.61	+0.7
2,028,041	+		Rru_A1733	0.72	-0.1
2,028,041	+		Rru_A1733	0.72	+1.9
2,028,042	-		Rru_A1733	0.72	+1.7
2,028,042	-		Rru_A1733	0.72	+1.6
2,028,396	-				-0.1
2,028,553	+		Rru_A1734	0.59	-0.1
2,028,553	+		Rru_A1734	0.59	+1.8
2,028,553	+		Rru_A1734	0.59	+1.1
2,028,554	-		Rru_A1734	0.59	+0.0
2,028,554	-		Rru_A1734	0.59	+0.7
2,028,563	+		Rru_A1734	0.63	+2.9
2,028,563	+		Rru_A1734	0.63	-0.1
2,028,563	+		Rru_A1734	0.63	+0.8
2,028,563	+		Rru_A1734	0.63	+1.1
2,028,563	+		Rru_A1734	0.63	+0.4
2,028,564	-		Rru_A1734	0.63	+1.4
2,028,564	-		Rru_A1734	0.63	+2.2
2,028,564	-		Rru_A1734	0.63	+1.3
2,028,663	+				+0.4
2,028,663	+				+1.1
2,028,664	-				-0.1
2,028,664	-				+2.2
2,028,774	+				+1.3
2,028,774	+				+0.3
2,028,774	+				+1.2
2,028,774	+				-1.1
2,028,774	+				-0.3
2,028,775	-				+0.5
2,028,775	-				+1.1
2,028,775	-				+1.3
2,028,775	-				-0.1
2,028,801	+				-0.1
2,029,044	+		Rru_A1735	0.28	-0.8
2,029,589	-				-0.1
2,029,648	-				+1.7
2,029,648	-				-0.1
2,029,687	+				+0.6
2,029,763	+				+0.6
2,029,763	+				-0.1
2,029,764	-				+0.9
2,029,772	+				+1.2
2,029,772	+				+0.9
2,029,786	+				+1.1
2,029,786	+				+0.7
2,029,787	-				+0.9
2,029,911	+				+1.2
2,029,991	+		Rru_A1736	0.12	+0.7
2,029,991	+		Rru_A1736	0.12	+0.9
2,029,991	+		Rru_A1736	0.12	+0.5
2,029,991	+		Rru_A1736	0.12	+1.6
2,029,991	+		Rru_A1736	0.12	+0.6
2,029,992	-		Rru_A1736	0.12	+1.4
2,029,992	-		Rru_A1736	0.12	-1.7
2,029,992	-		Rru_A1736	0.12	+1.4
2,029,992	-		Rru_A1736	0.12	-0.1
2,030,240	+				-1.1
2,030,240	+				+1.5
2,030,240	+				-0.1
2,030,299	-		Rru_A1737	0.25	+1.6
2,030,299	-		Rru_A1737	0.25	+1.0
2,030,505	+				-0.1
2,030,505	+				+0.4