Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1726

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,017,847	-				+2.7
2,018,062	+		Rru_A1725	0.22	-0.1
2,018,062	+		Rru_A1725	0.22	+1.5
2,018,062	+		Rru_A1725	0.22	+1.3
2,018,062	+		Rru_A1725	0.22	+1.5
2,018,062	+		Rru_A1725	0.22	+1.8
2,018,062	+		Rru_A1725	0.22	+1.2
2,018,062	+		Rru_A1725	0.22	-0.1
2,018,062	+		Rru_A1725	0.22	-0.1
2,018,062	+		Rru_A1725	0.22	+1.1
2,018,063	-		Rru_A1725	0.23	+1.3
2,018,063	-		Rru_A1725	0.23	+1.1
2,018,063	-		Rru_A1725	0.23	+0.7
2,018,063	-		Rru_A1725	0.23	+0.2
2,018,063	-		Rru_A1725	0.23	-0.1
2,018,063	-		Rru_A1725	0.23	-0.1
2,018,063	-		Rru_A1725	0.23	+1.0
2,018,063	-		Rru_A1725	0.23	-0.1
2,018,063	-		Rru_A1725	0.23	-0.1
2,018,071	+		Rru_A1725	0.24	-0.1
2,018,072	-		Rru_A1725	0.24	-0.1
2,018,308	+		Rru_A1725	0.54	+1.0
2,018,309	-		Rru_A1725	0.54	-0.1
2,018,309	-		Rru_A1725	0.54	+2.1
2,018,323	+		Rru_A1725	0.56	+0.8
2,018,324	-		Rru_A1725	0.56	-0.1
2,018,361	+		Rru_A1725	0.61	-0.1
2,018,362	-		Rru_A1725	0.61	+1.3
2,018,378	+		Rru_A1725	0.63	+2.4
2,018,379	-		Rru_A1725	0.63	-0.1
2,018,379	-		Rru_A1725	0.63	+1.9
2,018,388	-		Rru_A1725	0.64	+1.3
2,018,388	-		Rru_A1725	0.64	+1.3
2,018,417	-		Rru_A1725	0.68	+1.2
2,018,503	+		Rru_A1725	0.79	+0.9
2,018,503	+		Rru_A1725	0.79	+1.6
2,018,503	+		Rru_A1725	0.79	+0.6
2,018,504	-		Rru_A1725	0.79	+1.6
2,018,504	-		Rru_A1725	0.79	+1.1
2,018,504	-		Rru_A1725	0.79	+1.2
2,018,504	-		Rru_A1725	0.79	+1.1
2,018,551	+		Rru_A1725	0.85	+1.6
2,018,552	-		Rru_A1725	0.85	-0.1
2,018,552	-		Rru_A1725	0.85	+0.6
2,018,552	-		Rru_A1725	0.85	-0.1
2,018,667	+				+1.7
2,018,668	-				+1.8
2,019,166	+		Rru_A1726	0.11	-0.1
2,019,199	+		Rru_A1726	0.12	-0.8
2,019,199	+		Rru_A1726	0.12	+1.6
2,019,319	+		Rru_A1726	0.15	+1.0
2,019,320	-		Rru_A1726	0.15	-0.1
2,019,320	-		Rru_A1726	0.15	+0.5
2,019,344	+		Rru_A1726	0.16	-0.1
2,019,389	+		Rru_A1726	0.17	-0.1
2,019,447	+		Rru_A1726	0.19	+0.4
2,019,447	+		Rru_A1726	0.19	+0.7
2,019,447	+		Rru_A1726	0.19	-0.1
2,019,447	+		Rru_A1726	0.19	+0.7
2,019,447	+		Rru_A1726	0.19	+0.3
2,019,447	+		Rru_A1726	0.19	+1.4
2,019,447	+		Rru_A1726	0.19	+1.3
2,019,448	-		Rru_A1726	0.19	+1.4
2,019,448	-		Rru_A1726	0.19	-0.1
2,019,448	-		Rru_A1726	0.19	+0.5
2,019,448	-		Rru_A1726	0.19	+0.9
2,019,448	-		Rru_A1726	0.19	-0.1
2,019,448	-		Rru_A1726	0.19	+0.3
2,019,448	-		Rru_A1726	0.19	+1.2
2,019,505	+		Rru_A1726	0.20	+0.8
2,019,505	+		Rru_A1726	0.20	+0.4
2,019,505	+		Rru_A1726	0.20	+0.2
2,019,506	-		Rru_A1726	0.20	+0.2
2,019,506	-		Rru_A1726	0.20	-0.1
2,019,512	-		Rru_A1726	0.21	-0.1
2,019,512	-		Rru_A1726	0.21	+0.3
2,019,512	-		Rru_A1726	0.21	-0.1
2,019,512	-		Rru_A1726	0.21	+0.4
2,019,553	+		Rru_A1726	0.22	-1.1
2,019,554	-		Rru_A1726	0.22	+3.4
2,019,576	-		Rru_A1726	0.22	-0.1
2,019,600	-		Rru_A1726	0.23	-1.1
2,019,600	-		Rru_A1726	0.23	+1.5
2,019,600	-		Rru_A1726	0.23	+0.7
2,019,659	-		Rru_A1726	0.25	-0.1
2,019,659	-		Rru_A1726	0.25	-0.1
2,019,659	-		Rru_A1726	0.25	-0.1
2,019,659	-		Rru_A1726	0.25	+0.3
2,019,802	+		Rru_A1726	0.29	+1.3
2,019,802	+		Rru_A1726	0.29	-0.1
2,019,802	+		Rru_A1726	0.29	+0.9
2,019,802	+		Rru_A1726	0.29	+0.4
2,019,802	+		Rru_A1726	0.29	+0.4
2,019,802	+		Rru_A1726	0.29	-0.1
2,019,802	+		Rru_A1726	0.29	-0.1
2,019,802	+		Rru_A1726	0.29	-1.1
2,019,803	-		Rru_A1726	0.29	+0.2
2,019,803	-		Rru_A1726	0.29	-0.8
2,019,803	-		Rru_A1726	0.29	-0.8
2,019,803	-		Rru_A1726	0.29	+1.1
2,019,803	-		Rru_A1726	0.29	+1.9
2,019,803	-		Rru_A1726	0.29	+1.0
2,020,474	+		Rru_A1726	0.48	+0.4
2,020,474	+		Rru_A1726	0.48	-0.2
2,020,554	-		Rru_A1726	0.50	-0.1
2,020,646	-		Rru_A1726	0.53	-0.1
2,020,664	+		Rru_A1726	0.53	-0.1
2,020,664	+		Rru_A1726	0.53	+0.6
2,020,681	+		Rru_A1726	0.54	+3.0
2,020,681	+		Rru_A1726	0.54	-1.7
2,020,681	+		Rru_A1726	0.54	+3.6
2,020,682	-		Rru_A1726	0.54	-0.1
2,020,682	-		Rru_A1726	0.54	-0.1
2,020,682	-		Rru_A1726	0.54	-0.1
2,020,682	-		Rru_A1726	0.54	+0.1
2,020,682	-		Rru_A1726	0.54	-0.1
2,020,702	+		Rru_A1726	0.54	+0.6
2,020,763	-		Rru_A1726	0.56	+0.7
2,020,763	-		Rru_A1726	0.56	-0.1
2,021,239	+		Rru_A1726	0.69	-0.1
2,021,240	-		Rru_A1726	0.69	+0.9
2,021,329	+		Rru_A1726	0.72	+0.7
2,021,329	+		Rru_A1726	0.72	+0.6
2,021,329	+		Rru_A1726	0.72	+1.9
2,021,329	+		Rru_A1726	0.72	+0.7
2,021,485	+		Rru_A1726	0.76	-0.1
2,021,486	-		Rru_A1726	0.76	+0.6
2,021,486	-		Rru_A1726	0.76	+1.3
2,021,486	-		Rru_A1726	0.76	-0.1
2,021,499	-		Rru_A1726	0.77	+0.2
2,021,572	+		Rru_A1726	0.79	-1.1
2,021,572	+		Rru_A1726	0.79	+0.7
2,021,572	+		Rru_A1726	0.79	+1.7
2,021,572	+		Rru_A1726	0.79	-0.1
2,021,573	-		Rru_A1726	0.79	+1.1
2,021,573	-		Rru_A1726	0.79	-0.1
2,021,796	-		Rru_A1726	0.85	+0.3
2,021,822	-		Rru_A1726	0.86	-1.1
2,021,857	+		Rru_A1726	0.87	+1.5
2,021,857	+		Rru_A1726	0.87	+1.2
2,021,858	-		Rru_A1726	0.87	-0.1
2,022,088	+				+2.3
2,022,089	-				+1.7
2,022,089	-				-0.1
2,022,654	+				-1.1
2,022,654	+				-0.1
2,022,654	+				-0.1
2,022,654	+				-1.7
2,022,654	+				-0.1
2,022,654	+				-0.1
2,022,655	-				+1.1
2,022,655	-				-0.1
2,022,655	-				-0.1
2,022,656	+				-0.1
2,022,656	+				-0.1
2,022,656	+				-0.1
2,022,656	+				-1.1
2,022,657	-				+2.0
2,022,657	-				+0.1
2,022,657	-				+0.8
2,022,657	-				-0.1
2,022,657	-				-1.1
2,022,658	+				-1.1
2,022,658	+				-1.7
2,022,658	+				-1.1
2,022,658	+				+0.9
2,022,659	-				-0.1
2,022,659	-				+0.3