Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1705

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,995,544	-				+1.2
1,995,877	+		Rru_A1705	0.20	+1.5
1,995,877	+		Rru_A1705	0.20	+2.0
1,995,878	-		Rru_A1705	0.20	+1.8
1,995,878	-		Rru_A1705	0.20	+1.5
1,995,878	-		Rru_A1705	0.20	-0.1
1,996,115	-		Rru_A1705	0.41	-0.1
1,996,201	+		Rru_A1705	0.49	+1.6
1,996,201	+		Rru_A1705	0.49	+1.1
1,996,202	-		Rru_A1705	0.49	+1.8
1,996,202	-		Rru_A1705	0.49	+2.3
1,996,202	-		Rru_A1705	0.49	+1.9
1,996,436	+		Rru_A1705	0.70	-0.1
1,996,437	-		Rru_A1705	0.70	-0.1
1,996,537	+		Rru_A1705	0.79	+1.5
1,996,537	+		Rru_A1705	0.79	+1.7
1,996,537	+		Rru_A1705	0.79	+1.5
1,996,537	+		Rru_A1705	0.79	+1.3
1,996,538	-		Rru_A1705	0.80	-0.1
1,996,538	-		Rru_A1705	0.80	+2.7
1,996,543	+		Rru_A1705	0.80	+0.3
1,996,543	+		Rru_A1705	0.80	+1.6
1,996,543	+		Rru_A1705	0.80	+0.9
1,996,544	-		Rru_A1705	0.80	+1.3
1,996,544	-		Rru_A1705	0.80	-0.4
1,996,544	-		Rru_A1705	0.80	+1.3
1,996,544	-		Rru_A1705	0.80	+1.1
1,996,561	+		Rru_A1705	0.82	+0.9
1,996,561	+		Rru_A1705	0.82	+1.6
1,996,561	+		Rru_A1705	0.82	-1.1
1,996,561	+		Rru_A1705	0.82	-0.1
1,996,562	-		Rru_A1705	0.82	-0.1
1,996,582	+		Rru_A1705	0.84	+0.6
1,996,582	+		Rru_A1705	0.84	+1.6
1,996,600	+		Rru_A1705	0.85	-0.1
1,996,601	-		Rru_A1705	0.85	+1.2
1,996,601	-		Rru_A1705	0.85	-0.1
1,996,601	-		Rru_A1705	0.85	+0.5
1,996,601	-		Rru_A1705	0.85	-0.1
1,996,601	-		Rru_A1705	0.85	+1.3
1,996,646	+		Rru_A1705	0.89	+1.7
1,996,647	-		Rru_A1705	0.89	-0.1
1,996,649	+		Rru_A1705	0.90	-0.1
1,996,649	+		Rru_A1705	0.90	+2.3
1,996,650	-		Rru_A1705	0.90	-0.1
1,996,809	+				+0.5
1,996,809	+				-0.1
1,996,810	-				-0.1
1,996,810	-				-0.1
1,996,843	-				+0.0
1,996,843	-				+0.9
1,996,902	+		Rru_A1706	0.10	+2.3
1,996,902	+		Rru_A1706	0.10	-0.1
1,996,903	-		Rru_A1706	0.10	-0.1
1,997,037	+		Rru_A1706	0.20	+1.6
1,997,037	+		Rru_A1706	0.20	+1.4
1,997,037	+		Rru_A1706	0.20	+1.3
1,997,038	-		Rru_A1706	0.20	+0.4
1,997,038	-		Rru_A1706	0.20	-0.1
1,997,038	-		Rru_A1706	0.20	-1.1
1,997,038	-		Rru_A1706	0.20	-0.1
1,997,038	-		Rru_A1706	0.20	+1.4
1,997,066	-		Rru_A1706	0.22	+0.2
1,997,073	+		Rru_A1706	0.23	+2.3
1,997,073	+		Rru_A1706	0.23	+1.8
1,997,073	+		Rru_A1706	0.23	+2.0
1,997,073	+		Rru_A1706	0.23	-0.1
1,997,073	+		Rru_A1706	0.23	-0.7
1,997,074	-		Rru_A1706	0.23	-0.1
1,997,074	-		Rru_A1706	0.23	-1.1
1,997,074	-		Rru_A1706	0.23	-2.1
1,997,074	-		Rru_A1706	0.23	+1.8
1,997,074	-		Rru_A1706	0.23	+1.3
1,997,074	-		Rru_A1706	0.23	-0.1
1,997,313	+		Rru_A1706	0.41	+0.5
1,997,313	+		Rru_A1706	0.41	-0.1
1,997,313	+		Rru_A1706	0.41	+1.6
1,997,313	+		Rru_A1706	0.41	+2.7
1,997,314	-		Rru_A1706	0.41	+0.9
1,997,314	-		Rru_A1706	0.41	+0.8
1,997,314	-		Rru_A1706	0.41	+0.3
1,997,314	-		Rru_A1706	0.41	+0.5
1,997,314	-		Rru_A1706	0.41	-0.1
1,997,314	-		Rru_A1706	0.41	+1.4
1,997,379	+		Rru_A1706	0.45	-0.1
1,997,379	+		Rru_A1706	0.45	+1.3
1,997,379	+		Rru_A1706	0.45	-1.1
1,997,380	-		Rru_A1706	0.45	+1.3
1,997,646	+		Rru_A1706	0.65	+0.9
1,997,646	+		Rru_A1706	0.65	-1.1
1,997,647	-		Rru_A1706	0.65	+1.1
1,997,647	-		Rru_A1706	0.65	-0.1
1,997,647	-		Rru_A1706	0.65	-0.1
1,997,739	+		Rru_A1706	0.72	+1.1